Gene Dshi_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4174 
Symbol 
ID5714689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand+ 
Start bp23458 
End bp24015 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID641277069 
Producthypothetical protein 
Protein accessionYP_001542365 
Protein GI159046697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.044221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.709367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TTCTTCTTTC CGCCGCCCTC GCCCTGCCGC TCGCCGCGCC CGTATCGGCC 
AGCGCCAGCC TCGGCGGCAC GCCCGTCACC GCCGAGACCC TGGTCGACCG GGCCGAAATG 
ATCCGCATCG CGGATGCCAT CGACGCCGCG GTGGATGCCA AGGACTGGCC GGTCGCGCGC 
AGCTTCTTCG CCGATGAGAT CATGGTCGAT TTCACCTCGC TGATCGGTGG CGACCCGGCC 
ACGATCCCCG CCGATGCGCT CATCGCGGGC TGGGCCGGGA ACCTGACCGA CGAGAAGACC 
TCCTTCCACC TGCGCGGCAA TCACCGGATC GGTTTTGACG GCGCCGACCG CGCGGTGATG 
CAGTCCCATG GCTATGCCTG GAACCGGATG GACCGGGGCG CCGCGCCGGA AAATGGCGGC 
GATCCCCTGT GGGAGGTCTG GGGGAGCTAC ACCCATGTGT TCGAGCGCAG CGAAGCAGGC 
TGGAAAGTCA CTGCCATGAC CTTCACCGCG ATGGCGCAAC GGGGCAATTC CTTCGTGCGC 
GACACGCCGG GCAGCTGA
 
Protein sequence
MKALLLSAAL ALPLAAPVSA SASLGGTPVT AETLVDRAEM IRIADAIDAA VDAKDWPVAR 
SFFADEIMVD FTSLIGGDPA TIPADALIAG WAGNLTDEKT SFHLRGNHRI GFDGADRAVM 
QSHGYAWNRM DRGAAPENGG DPLWEVWGSY THVFERSEAG WKVTAMTFTA MAQRGNSFVR 
DTPGS