| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4172 |
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| Symbol | |
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| ID | 5714687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 21403 |
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| End bp | 22290 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641277067 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001542363 |
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| Protein GI | 159046695 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0833223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC GATACCAGGA CATCTATCCG TCCCTGCCCT TGCTCAACAG CGAGGCGCAG
ACCCATATCT CCGCCGCGGC GCTGATGTCC GTGCGCTATT TCCAGGCCGC CCCGGACGAG
ATGCCCGAAG ATGTCTTCGC CGAGCACCAC GTGCTTCTGA ACCTGCAGGA TGCACCGCAC
CGGGTGCAGA ACCGGCGCGA CGGGGTGCTG CATGATTTCA CCTTCCACAA GCACGAGATC
GTGGTCACCC CGGCGGGGAT GCGGTCGGGC TGGCGCTGGT TCGCGACGTC GGACGTGATC
GTGGTGACGC TCGACCCCGA GATGGTCGGC CGCTTCGCCC AGTCCGAGCT CGGCCTGCTG
CTCGACCCGC AGCAATTCCG CGACCTGCCG CTCTTCTCCG ACCCCGATCT CTGCGCCGCC
GGGGTCATGC TGCGCGACGC GCTGGAGGAT GACAGCCTGA CCTCCGGCGT GATGTTCGAG
GCACTCTCCC GGGTGCTGCT GGTCAAGCTG CTGCAACGCT ACGGGCAGCG CCGGGTCGAG
GATGCGGACC TCTCGGCGCG CTTCACGGCG CAGCATTACA ACCGGGTGCT CACCCATATC
CGCGCCCATC TCGACCGCAC GATCACGGTC GAGCATCTGT CGCGGGAGGC GGGCATGTCG
CCCTCCCATT TCAGCCGGGT CTTCAAGGAA ACACTGGGCA CCACGCCCAT GCAGTATGTC
ATGGCCTACC GGATCGAGCA GGCGATGAAG ATGATGGCCG ATCCCCTGCG CCCCCTGGGC
GATATCGCGC TGGCCTGCGG CTTTGCCGAC CAGGCGCATT TCTCGCGCAG CTTCAAGCAG
GTCACGGGCC GAACCCCCCG CGCGCACCGC GCCGCCCTGT CGGCCTGA
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| Protein sequence | MPRRYQDIYP SLPLLNSEAQ THISAAALMS VRYFQAAPDE MPEDVFAEHH VLLNLQDAPH
RVQNRRDGVL HDFTFHKHEI VVTPAGMRSG WRWFATSDVI VVTLDPEMVG RFAQSELGLL
LDPQQFRDLP LFSDPDLCAA GVMLRDALED DSLTSGVMFE ALSRVLLVKL LQRYGQRRVE
DADLSARFTA QHYNRVLTHI RAHLDRTITV EHLSREAGMS PSHFSRVFKE TLGTTPMQYV
MAYRIEQAMK MMADPLRPLG DIALACGFAD QAHFSRSFKQ VTGRTPRAHR AALSA
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