| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4162 |
|---|
| Symbol | |
|---|
| ID | 5714732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009959 |
|---|
| Strand | - |
|---|
| Start bp | 9725 |
|---|
| End bp | 10768 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641277057 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001542353 |
|---|
| Protein GI | 159046685 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0349192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC GCCGGGCCGC TTTCGCCATT CCCGGCGATC TGAGCACGCC GACGGGCGGC
TATATCTACG AGCGTCGCCT GCTCGAAGGG CTGTGGGCGC AGGGGCGGGA TGTCACCCAT
ATCCGGCTCG GCACCTCCTT CCCCGACCCG ACCGACGCCG ACATGGCCGA CGCCATCGCT
CAGCTTGCGG CGCTGGAGCC GGACCGGGCG GTGATCCTCG ACGGGTTCAT CTCGGCCACG
CTCGACACAA GGGCACTGGC CGCGCTGCCC CTGCCCACGG TGGCGGTGGT GCATCACCCG
CTGGCACTGG AGAGCGGGCT GGATGCCGAA CGGCGCGACC GGCTCTACCG GGTCGAGCGG
GACAACCTTG TGCATATCGA CCATGTCGTG GTGCCCAGCC CCAACACCGC GCGCACCCTG
ACCGCCTCCT ACGGTGTCGC GGCGGACCGG ATCACCATCG CCCGCCCGGG CACCGACCGC
CCCACCCGGC CCCGCGCGCC CGCGACCCCG CCGCTGATCC TGTCCGTGGG GATCCAGCAC
CCGCGCAAGG GCCACGATAC CCTGCTGCGC GCGCTGGCGC GGCTGACCCA CCTGGACTGG
ACCGCCGTGA TCGCCGGGAA GGCCTATGAC CCGGCCCATG CCGCCCTGCT CGACCGGCTG
CTGGACGAGA CGGGCCTGCG CGACCGGGTG CGGATCGCGG GCTACGTGGC GGACGCGGCG
CTGGCCGAGC TCTACGCCAC GGCGACGGTC TTCGCCCTCG CAACCCGTTA CGAAGGCTAT
GGTCTCGTCT TCGACGAGGC CCTGGCCCAT GGCCTGCCCA TCGTCAGCTG CGCGACGGGG
GCCGTGCCCG AAACCGTGCC TGCCGAGGCC GGGCAACTGG TGCCGCCGGA CGATGCGGCG
GCCTTTGCCA CGGCGCTCGC CGCGCTGCTG ACCGACGACG CCCTGCGCGC GCGAACCGCC
GCCGCCGCCG CCCGCGCGGG CACCCGCCTG CCCGGCTGGG ACGACACCGC CGCGACGGTG
GGCGCGGTGC TCGAAACCCT GTAG
|
|---|
| Protein sequence | MSLRRAAFAI PGDLSTPTGG YIYERRLLEG LWAQGRDVTH IRLGTSFPDP TDADMADAIA
QLAALEPDRA VILDGFISAT LDTRALAALP LPTVAVVHHP LALESGLDAE RRDRLYRVER
DNLVHIDHVV VPSPNTARTL TASYGVAADR ITIARPGTDR PTRPRAPATP PLILSVGIQH
PRKGHDTLLR ALARLTHLDW TAVIAGKAYD PAHAALLDRL LDETGLRDRV RIAGYVADAA
LAELYATATV FALATRYEGY GLVFDEALAH GLPIVSCATG AVPETVPAEA GQLVPPDDAA
AFATALAALL TDDALRARTA AAAARAGTRL PGWDDTAATV GAVLETL
|
|---|
| |