Gene Dshi_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4161 
Symbol 
ID5714731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp8902 
End bp9714 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID641277056 
ProductMltA-interacting MipA family protein 
Protein accessionYP_001542352 
Protein GI159046684 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0570636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGAT TTCCAAGGCC CGGCGCCCTG ATCCAGGGGG CTCTGGCGGC GCTTGCCCTG 
GTGGGTGCCG CCGGGACGGC CATGGCCGAG ACCCCGATCG AGCTACCCGG GGTCCGGGGG
GTCGGGCTGC TCGCCTTCGG GGCGGGGCCG CAATATATCG GCGCGGACGA GTCGGTCTGG
CTGCCGGTGC CCGCGGGCAC CTTCGCCCTG GGCGAGACAA GGCGCGTCAC GGTGACGGGC
AATTACCTCA ATATCGACCT GCTGGATCAT CCGAACTGGA GCGCCGGGCC CGCCGGGGTG
CTGCGCTTCG GGCGGGGCGA CGTCAAGGAT GACGAAGTCG CGGCCCTGCC GGATATCGAC
ATGTCCCTCG ATCTGGGGGG GTTCGTCGCC TACGAGGTGG TGGGCGCGGA TATCCGCCAG
CGTCGGGCCG TCGGGCTGAG CGTGGTCCAG GATGTCACCG GCGCCCATGG CGGCTTCGTC
GCTTCGGCCT ATGCAAGGGC CTGGACGCCC CTGGGCGCGT TCGGTGCGCT CGGGATGGGG
GCCGCGGTCA GCTATGGCTC GGGCGATTAC ATGGACAGCT ATTTCTCGGT GGATGCCCAA
GGGGCGGCGG CCAGCGGGCT GGAGGTGTTC TCGGCCGGGG GCGGCGCGCG CGACGCGCGG
GTTTTCGCCA TCTACGTCCA GCCCGTCAGT CGCAGCTGGG CCATCGGCGG GGGGCTTATC
TATGGCTGGC TGCTGGACGA TGCGGCCGCC AGCCCGGTGG TGGACAGCCG CGGGCAGCTT
TACGCCGGGG TCGGGATCGC GCGGATCTGG TAG
 
Protein sequence
MRRFPRPGAL IQGALAALAL VGAAGTAMAE TPIELPGVRG VGLLAFGAGP QYIGADESVW 
LPVPAGTFAL GETRRVTVTG NYLNIDLLDH PNWSAGPAGV LRFGRGDVKD DEVAALPDID
MSLDLGGFVA YEVVGADIRQ RRAVGLSVVQ DVTGAHGGFV ASAYARAWTP LGAFGALGMG
AAVSYGSGDY MDSYFSVDAQ GAAASGLEVF SAGGGARDAR VFAIYVQPVS RSWAIGGGLI
YGWLLDDAAA SPVVDSRGQL YAGVGIARIW