Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4161 |
Symbol | |
ID | 5714731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 8902 |
End bp | 9714 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641277056 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_001542352 |
Protein GI | 159046684 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0570636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAT TTCCAAGGCC CGGCGCCCTG ATCCAGGGGG CTCTGGCGGC GCTTGCCCTG GTGGGTGCCG CCGGGACGGC CATGGCCGAG ACCCCGATCG AGCTACCCGG GGTCCGGGGG GTCGGGCTGC TCGCCTTCGG GGCGGGGCCG CAATATATCG GCGCGGACGA GTCGGTCTGG CTGCCGGTGC CCGCGGGCAC CTTCGCCCTG GGCGAGACAA GGCGCGTCAC GGTGACGGGC AATTACCTCA ATATCGACCT GCTGGATCAT CCGAACTGGA GCGCCGGGCC CGCCGGGGTG CTGCGCTTCG GGCGGGGCGA CGTCAAGGAT GACGAAGTCG CGGCCCTGCC GGATATCGAC ATGTCCCTCG ATCTGGGGGG GTTCGTCGCC TACGAGGTGG TGGGCGCGGA TATCCGCCAG CGTCGGGCCG TCGGGCTGAG CGTGGTCCAG GATGTCACCG GCGCCCATGG CGGCTTCGTC GCTTCGGCCT ATGCAAGGGC CTGGACGCCC CTGGGCGCGT TCGGTGCGCT CGGGATGGGG GCCGCGGTCA GCTATGGCTC GGGCGATTAC ATGGACAGCT ATTTCTCGGT GGATGCCCAA GGGGCGGCGG CCAGCGGGCT GGAGGTGTTC TCGGCCGGGG GCGGCGCGCG CGACGCGCGG GTTTTCGCCA TCTACGTCCA GCCCGTCAGT CGCAGCTGGG CCATCGGCGG GGGGCTTATC TATGGCTGGC TGCTGGACGA TGCGGCCGCC AGCCCGGTGG TGGACAGCCG CGGGCAGCTT TACGCCGGGG TCGGGATCGC GCGGATCTGG TAG
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Protein sequence | MRRFPRPGAL IQGALAALAL VGAAGTAMAE TPIELPGVRG VGLLAFGAGP QYIGADESVW LPVPAGTFAL GETRRVTVTG NYLNIDLLDH PNWSAGPAGV LRFGRGDVKD DEVAALPDID MSLDLGGFVA YEVVGADIRQ RRAVGLSVVQ DVTGAHGGFV ASAYARAWTP LGAFGALGMG AAVSYGSGDY MDSYFSVDAQ GAAASGLEVF SAGGGARDAR VFAIYVQPVS RSWAIGGGLI YGWLLDDAAA SPVVDSRGQL YAGVGIARIW
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