| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4159 |
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| Symbol | |
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| ID | 5714729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 6606 |
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| End bp | 7658 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641277054 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001542350 |
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| Protein GI | 159046682 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.44287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG CACGTTGGCA TGGCGCGAAG GACATTCGCG TCGAGGATGT GGACGAACCG
ACCCCCGGCG CGGGGGAGGT CAAGATCAAG GTCGCCTGGA CCGGGATTTG CGGCAGCGAC
CTGCATGAAT TTCTCGCTGG GCCGATCTTC GTGCCGGTGG GGGAGGATCA CCCCCTCAGC
CACGACAAGG CCCCGATCAC CATGGGACAC GAGTATTGCG GCGAGATCAC CGAGCTGGGC
GACGGGGTCA CGGACCTGTC GGTCGGGGAC CGGGTGGCGA TCGAGCCGAT CTTCGCCTGC
GGCACCTGCG CGGCCTGTCG CGACGGGCGG TACAACCTGT GCGAAAAGCT GGGCTTCGTC
GGCCTGTCCG GTGGCCATGG CGGGTTTGCG GCCTATTCGG TGGTGCCCGC GCGCATGTTG
CACAGGATGC CCGAGGGCCT GTCGATGGAA CAGGGCGCGC TGGTCGAGCC GGCGGCGGTC
GCCCTGCACG CGGTACGGGT CAGCGCGTTC AAGGCCGGGG ACAGGGCGGC GGTGTTCGGG
GCCGGTCCCA TCGGGCTGCT GGTGGTCGAA TCGCTCCGGA TCGCGGGGGC CTCCAAGATC
GTGGTGGTCG AGCCGTCCGA GACCCGCCGC GCCAAGGCCA TGGAGTTGGG CGCGACCACG
GCGGTCGATC CCGGGGCGGA GGATGCCGTC GCCGCCGTCC AAGCCGCATG CCCGGGGGGC
GTCGAGGTTG CCTTCGAGGT GACCGGCGTG CCCGCGGTGC TGGCGCAAGC CATCGACGCG
ACCCGCTACG AGGGCGAGAC GCTGGTGGTG TCGATCTGGG AAACCGAGGC CAGTTTCCAG
CCCAACACCG TGGTTCTGAA GGAGCGGAAC ATCAAGGGGA CGATTGCCTA TCGCAACGTC
TATCCGGCGG TGATGGACCT GATGCAGCAA GGCTATTTCC AGGCCGAACG GCTGGTGACG
CGCCGGATCG GGCTGGACGA TATCGTGCGC GACGGGTTCG AGGCGCTGGT GGCCGAGAAA
TCCCAGATCA AGATCCTGGT CGAAGCGCCC TGA
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| Protein sequence | MKAARWHGAK DIRVEDVDEP TPGAGEVKIK VAWTGICGSD LHEFLAGPIF VPVGEDHPLS
HDKAPITMGH EYCGEITELG DGVTDLSVGD RVAIEPIFAC GTCAACRDGR YNLCEKLGFV
GLSGGHGGFA AYSVVPARML HRMPEGLSME QGALVEPAAV ALHAVRVSAF KAGDRAAVFG
AGPIGLLVVE SLRIAGASKI VVVEPSETRR AKAMELGATT AVDPGAEDAV AAVQAACPGG
VEVAFEVTGV PAVLAQAIDA TRYEGETLVV SIWETEASFQ PNTVVLKERN IKGTIAYRNV
YPAVMDLMQQ GYFQAERLVT RRIGLDDIVR DGFEALVAEK SQIKILVEAP
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