| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4152 |
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| Symbol | |
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| ID | 5714677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | - |
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| Start bp | 84463 |
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| End bp | 85098 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641277048 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001542344 |
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| Protein GI | 159046675 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.290737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACAA TAGCACGTGG CCACGACCTC TGGAGGTTTC CAAGTAGCGC GGACAAAATG
TTTGAAGATA GGCGAATACA GTTTAAAGAA AGAAATAAGT GGAATGTTCA TATCGACTCT
GATGGATATG AAGTAGATCA GTACGACCGA CTTAACCCAG TCTATATCAT CATACATTCC
TCGGAGAACC CACATTGTGG ATCAATGCGG ATACTTCCGC TTGGGAAGGG AACAATGTTG
ATGGATTACT TTTCTGAAAC AGTAAAAGGG TACAGCTTTA AAGATAAAAA AATATGGGAG
TGCACACGCT TCTGTGTTTC TAAGGGGCAA GGGAGATCAG TAGCTTTAAA GCTCTTTGCA
TCTGGATCTG CCTTTCTTTC CTATACTGGG TTCTCAAACT TCATTGCAAT TTTTGATAAA
AAAATGCTTA GATTCTATAG GGCTATTGGT ATATCACCAA AAATTATCGG TGTATATAGT
TACCTTGGAG AAGAAGTCTA CTCTGGCCTG TTCAACTGTA ACCAAGAAAG ATATAAAAAG
TTTCTCATTT CTGGAAATAT TGAGTCTAGT ACAATCACGG GTGCAATTTC TCGCTTCCAT
GAAAGGGAAA CGTATATCTA TCCAAAGGCA GCCTAG
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| Protein sequence | MITIARGHDL WRFPSSADKM FEDRRIQFKE RNKWNVHIDS DGYEVDQYDR LNPVYIIIHS
SENPHCGSMR ILPLGKGTML MDYFSETVKG YSFKDKKIWE CTRFCVSKGQ GRSVALKLFA
SGSAFLSYTG FSNFIAIFDK KMLRFYRAIG ISPKIIGVYS YLGEEVYSGL FNCNQERYKK
FLISGNIESS TITGAISRFH ERETYIYPKA A
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