| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4142 |
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| Symbol | |
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| ID | 5714627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 74668 |
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| End bp | 75609 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641277038 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001542334 |
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| Protein GI | 159046665 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.627986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT CAGATCGGAT CTACGTGGCT GGCCATCGCG GCATGGTGGG CAGTGCCATC
TGCCGAGCGC TCACCGCGCA GGGCTACACC AACCAGCTCA CCCGTACCCG GGCCGAGCTC
GACCTGCTGG ACGGGGCCAC GGTGCGGGCC TTCTTCGAAG CCGAGCGCCC CGATCATGTG
TTCCTGGCCG CCGCCAAGGT GGGCGGGATC CTGGCCAATG ACACCGAAGG CGGGGATTTC
ATCCGCGAGA ACCTGCTGAT CCAGACCCAT GTGATCGACG CCGCCTACCG GGCGGGGGTG
CAGAAATTCG CCTTCCTCGG ATCCAGTTGC ATCTATCCGA AATTCGCACC CCAACCTATC
TCCGAGGACA GCCTGCTGAC CGGGGCGCTG GAGCCGACCA ACTCCGCCTA TGCGGTGGCC
AAGATCGCCG GAAAGGAGAT GTGCGACGCC TATCGCCGGC AGTTCGGCTT CGATGCTTTC
ACGATCATGC CCTGCAATGT CTACGGGGTG GGGGACAATT TCGACCCCCT GGGCAGCCAT
GTGGCCGCGG GCCTGATGCG GCGCTTTCAC GAGGCGAAGA CGGTCGGCGC CTCGGAGGTG
ACCTGTTGGG GCACGGGCAG CCCGCTGCGC GAGTTCATCT ATGCCGACGA TCTGGGCGAT
GCCTGCGTCT TCTTGATGAA CACCTATACC GAGGGCGGCA TGATCAATGC CGGCTCCGGC
CAGGAGGTCA CGATCCGGGC GCTGGCCGAA ACCATCCGCG ACGTGGTCGG ATTTGAAGGG
GCGCTGGTAT GGGATGAAAC CAAGCCCGAC GGCACCCCGC GCAAGCTGAT GGACAATTCC
CGGCTCGCGG CCTTGGGCTG GAAGCCGAAG ATCGAGCTGC GCGACGGGTT GACGGAGATG
TACCGCTGGT TCGTCGACAC CCATGCGACG GAACGGGCCT GA
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| Protein sequence | MDISDRIYVA GHRGMVGSAI CRALTAQGYT NQLTRTRAEL DLLDGATVRA FFEAERPDHV
FLAAAKVGGI LANDTEGGDF IRENLLIQTH VIDAAYRAGV QKFAFLGSSC IYPKFAPQPI
SEDSLLTGAL EPTNSAYAVA KIAGKEMCDA YRRQFGFDAF TIMPCNVYGV GDNFDPLGSH
VAAGLMRRFH EAKTVGASEV TCWGTGSPLR EFIYADDLGD ACVFLMNTYT EGGMINAGSG
QEVTIRALAE TIRDVVGFEG ALVWDETKPD GTPRKLMDNS RLAALGWKPK IELRDGLTEM
YRWFVDTHAT ERA
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