| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4139 |
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| Symbol | |
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| ID | 5714601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | - |
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| Start bp | 71700 |
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| End bp | 72764 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641277035 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001542331 |
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| Protein GI | 159046662 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.927486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACGGG CATTGATCAC AGGCGTGACC GGGCAGGACG GGGCCTATCT GTCAGAACTT
CTTCTGGCCA AGGGCTATGA CGTGCACGGG ATCAAGCGAC GCTCGTCGTC GTTCAATTCC
GCGCGGATCG ACCATCTTTA TCAGGATCCC CACGAGGCGG ACCGCCGCTT CACCATGCAT
TACGGCGACA TGACTGACAG CACGAACCTG ATCAGGGTCG TGCAGGAGGT GCAACCGGAC
GAGATCTACA ACCTCGCGGC CCAGTCCCAT GTGCAGGTCA GCTTCGACAC CCCCGAATAC
ACCGCCAACG CGGACGCGGT GGGCACTCTG CGCCTGCTGG AAGCCCTCCG CATCCTGGGG
ATGGAGAAGA CCACCCGGTT CTACCAAGCC TCCACCTCGG AATTGTACGG CCTGGTCCAG
GAAGTCCCCC AGAGCGAAAC CACCCCCTTC TATCCGCGAT CTCCCTATGC GGCGGCCAAG
CTCTATGCCT ACTGGATCAC GGTGAACTAC CGCGAAGCCT ACGGCATCCA CGCCTCCAAC
GGGATCCTGT TCAACCATGA AAGCCCCCTG CGCGGGGAGA CCTTCGTGAC CCGCAAGATC
ACCCGGGCGG TGGCGGCGAT CCACCTGGGT CGGCAGGATC GGTTCTATCT GGGCAATCTC
GACGCCAAGC GCGACTGGGG CCATGCCCGT GACTACGTGG AAGGAATGTG GCGCATCGTG
CAGCAGGACA AGGCGGAGGA TTACGTGCTG GCCACGGGCG AGACCCATAC GGTGCGCTCC
TTCGTGGACG CCGCTTTCGC AGAGATCGGC GTGACCCTGG AGTGGCGCGG CGCGGGCGTG
GACGAGAAAG GCTACGACAC CGCCGACGGC ACCCTGCGGG TCGAGGTCGA TCCGCGCTAT
TTCCGCCCCA CAGAGGTGGA TCTGCTGATC GGGGATCCCT CCAAGGCCCA TCGGGAACTG
GGCTGGCGGC ATACGACCAC CCTGGCGGAG ATGGTCTCGG AAATGGTGGC CAGCGACATC
AAGGTGATCG CCGAGGAAGG TGAGCGCCGT GAGCGCCATG ACTAA
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| Protein sequence | MKRALITGVT GQDGAYLSEL LLAKGYDVHG IKRRSSSFNS ARIDHLYQDP HEADRRFTMH
YGDMTDSTNL IRVVQEVQPD EIYNLAAQSH VQVSFDTPEY TANADAVGTL RLLEALRILG
MEKTTRFYQA STSELYGLVQ EVPQSETTPF YPRSPYAAAK LYAYWITVNY REAYGIHASN
GILFNHESPL RGETFVTRKI TRAVAAIHLG RQDRFYLGNL DAKRDWGHAR DYVEGMWRIV
QQDKAEDYVL ATGETHTVRS FVDAAFAEIG VTLEWRGAGV DEKGYDTADG TLRVEVDPRY
FRPTEVDLLI GDPSKAHREL GWRHTTTLAE MVSEMVASDI KVIAEEGERR ERHD
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