Gene Dshi_4137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4137 
Symbol 
ID5714639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp69126 
End bp70604 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content57% 
IMG OID641277033 
Producthypothetical protein 
Protein accessionYP_001542329 
Protein GI159046660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.970696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG TTGAGCTGCC CTCCAGACCC ACTGCCTTCC AGGCGGCCCG GGATGCCCGT 
GCGCCCGTGC TCGTCACGCT GGCCCTGGTC GCGATCTGCA TTCCGGTCCA GTTCGCGGCA
GGGCCTTTGG TGCTCAGTCC GATACGGTTT TTACTGCTGA TCTGTACCGT ACCACTCTTC
ATCCGTCTGG TGACGGGCAG TTATGGCAGG ATCTTGTTTG TGGATGTCTT GATAGTGGCC
CATGTGGTCT GGCAGCTAGT CGCAATGCTA CACAATAACC CGGAGAGCGC TGTGCAGTTC
GTCGGCTCAA ACGGGTTGGA GTTTTTGGGA GCCTACCTGG TGGCACGCTG TGGCATCAGG
AATCGGGATG ACTTCGTCGC TTTTATCAAG TTGTTCATGT TACTGATCCT GTTGCTGATG
CCGTTTGCAA TGATCGAAAC CCAGACCGCG CGCCCTGTAA TCCCGGACTT ATTCAGAAGC
CTTGGATTGC AAGGGCTCAC AGATGTTCGG GCGGACAAGC GCCTGGGACT CGAACGCGCA
CAGGTGGTGT TCCCTCACCC GATTCATTAC GGCCTGTTCT GCTCCACAGC TCTCGCGCTA
GTCTATCTGG GGCTTCAGGA TCGCATGCCA CGACCCAAAA GAATTATGCT GGCATTCGCG
ATCATAATCA GCACCGTCAT GTCGGTCTCG AGCGGCGCAC TTCTTCCGCT CATGATCCAG
ATCAGCCTGA TCGCCTGGGC TGGGATCACC CACAGAACCA AGTATCGCTG GTGGCTCTTG
ATCGCGATTT TGGCGCCCTG CTACCTTTTG TTGGAAATAA TTTCTGACCG GCCCGCACAT
ATCGCCCTTC TCTCACATCT CACCTTCAAT GCGCATAATG TCTACTGGCG TACGATCATC
TTCGATTATG GCATGCTGAA TGTCTGGGCT AACCCGATCT TCGGGCTGGG CCTGAAGGAC
TGGGTGCGCC CGTCCTTCAT GCATTCGGGC TCAATGGACA ATTTCTGGCT CCTGAACGCG
GTCCGCTTCG GGGTTCCAGG CTTTCTGACG GTCGCGGGTG CGTTCGCCAT TGCTCTTTTC
CGTATCATGC ACCTTCGCTT TCCGACGGAC CACCCTTTGC GGCAGATACG CCTGGCTTAC
GTAGTCGGCA TGATCAGCCT GCTTCTAACC CTATGCACGG TGCATGTCTG GGGACCAGTC
TATTCACTGG TTATGCTATT CATGGGTAGC GGGATCTGGC TGATTACTGC CGACACGGCG
GCCGAAACCT TCGATGAGAC ATCTGCAACC GAACCTGCCC GGCCCCAAAG CCGTTATACT
CGCTTCGCAA CACAAACGGT TCCGAAAACC TCAAGGGCAA ACGCCGGAAC TCGTAAGGCG
GCGGCTGTCA GGTCGCGCCA CGGCACTGGC GCATCAGGTC CGCCAGAGCG TTCTCATAGA
CAGTCAATTT CTGCCGGCCG CGGACCAGGG CGGCGCTGA
 
Protein sequence
MSTVELPSRP TAFQAARDAR APVLVTLALV AICIPVQFAA GPLVLSPIRF LLLICTVPLF 
IRLVTGSYGR ILFVDVLIVA HVVWQLVAML HNNPESAVQF VGSNGLEFLG AYLVARCGIR
NRDDFVAFIK LFMLLILLLM PFAMIETQTA RPVIPDLFRS LGLQGLTDVR ADKRLGLERA
QVVFPHPIHY GLFCSTALAL VYLGLQDRMP RPKRIMLAFA IIISTVMSVS SGALLPLMIQ
ISLIAWAGIT HRTKYRWWLL IAILAPCYLL LEIISDRPAH IALLSHLTFN AHNVYWRTII
FDYGMLNVWA NPIFGLGLKD WVRPSFMHSG SMDNFWLLNA VRFGVPGFLT VAGAFAIALF
RIMHLRFPTD HPLRQIRLAY VVGMISLLLT LCTVHVWGPV YSLVMLFMGS GIWLITADTA
AETFDETSAT EPARPQSRYT RFATQTVPKT SRANAGTRKA AAVRSRHGTG ASGPPERSHR
QSISAGRGPG RR