Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4130 |
Symbol | |
ID | 5714664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009958 |
Strand | + |
Start bp | 62343 |
End bp | 64739 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641277028 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_001542324 |
Protein GI | 159046655 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGTT CCTCCTACTT CAAGGATTAC ACTGCCCATC AAAACGCCAC CATCCTTGTT TCCAGCACAG AAGAACTCAA TGCCGCTGTG GCGGAGCTTG CTGGCACGAC CGGGGGTACG GTTCTGCTCT CGGGTGAGGC TGGTCCCTAC CGATTGGATG CGCGCAACCT CGGCGATAGT GCCGAGAGCG CGGTTCTGAT CACCTCCCAA GACTCGAACA ACCCCGCGCA ATTAAAGCAG GTCTATATCG ACAACAGTGT CTATCTCAGC CTGACCGATG TGACGATCGA TAGCGGGGAT TACGGATTCG AGCGGTCAGG CCATCTCCAT GACATCTATG TAAAGTCCGG AGCGCATCTG CAATTCGTCG ATCTGACCAT GACCAGCACT GCCGAAGCCC CCCTCGGCTT CGATGACGAC ACCGTGAAGG CCGAGGATGC CGTCTATCTG CGCAATGCCT CGGACGTTCT ATTCGCCGAC AGCACGATCT CGAATTACTA CCACGGTATC AGTTTGGCAG GGGTACGCGA TACGATCGTA ACCGGCAACG ACATCTCCGC CTTGCAGGGG GACGGTATTC GCGGCGGCGG CGTGAACAAT GTTCTGGTCT CGGACAATCA CATCCATGAT TTCTTGGGTG CGACCAACGA GTACAACCAC CCAGACATGA TCCAGTTCTG GACCGGGTTC CCAGAGGGGA TGACCAACAC CGACCTGACG ATTACCGGTA ACCTGCTCAA TGCGGGCGAA GGCTCCGCTG CTCAGGGCAT TCTCGTACAG AACGAGGCCT TCGATGACGC GGGAGACCCT TTGGAGGGAG TTTATGGTCA AAACCTGACG ATCACGGACA ATGTCATCCA TTCGGGCATG TCTAATGGCA TCGGGATCAT CGGATACCAA GGGGTCGAGG TTGCCAACAA TTCGGTGCTT TGGAACGAGG GCGCCGTGCT GTCCCAGACG GCTGATGCCG TACCGGCCTC CAACCCTCCC TGGATCTTGG TACGCAACAG CTTGGAAGTC GAGACCGCTG GCAATGTCGC TCACTTGGTC CGGATCGAAA CCGAGGACCA GGCCGAGACC AATTACTTTC TGGACTACGA TAATCCGAGT GCGCCGAATT ATGCCTATGC CCATGTGATC GGCCTTGCCG CCGATGGCCA GACGGACGTC TACGACTTGC AATTCCGGCC CGATAGCCCA CTCAACGGGG TCTCTGGCGC TGAGGCCAGC ACTTGGACGC CCAGCGAGGC CCCGGTGAAC GCCGTGATCT CCCAGCAGCC CAGTCTCGAG GACCGCGCAG CGGTGGAGTT GTCGGCCCGC TATTCGACTG TGGATGGACA ACTGGTTGAT CCCGAGACTG CACAAGTCTT CTGGACCTTG GCCGATGGCA CCGTCCTGGA GGGCCTGGAG GTCACGGTAA CTTTCGACAC GCCGGGGCTG CACGAGGTCA CGCTCGATGT CCTTGCGCCT GATGGCAGTT CCGACAGCGC CACGAGATCC GTCGACATCC GCGGAAACGG CCTGTTCGAG GCGGATTTCG CCCGTTCCGA AACCTTTGGC GACGGTGTCG AGATTGTCGA TCCCAATGGC GAAGCGTTCT CCAAGAAGGG CGTGTTCACT CTGGATGGCG ACAGTGTTTT CGAGGTGACC CGCGGAAACC CAGAGTTCGA GACGCTTCAT ACCCTGTCCA TGGACGTCTC ATTCAAACCG GACGCGTTCG AAAAAAACGG CTGGCTGGTG AAATGGCTCA AGGCGGTCGA TCTGCGGGTG ACAGACGAGA AGGGGCTATG GCTCAAAATC GAGACCGATG CCGACGTTTA CGAGATCCGC ACCGAGGGTA ACCTTCTTGA GAAGGGCGAA TGGGCTGACA TCGCGGTCGA TTTCGACAGC CATGCGGGGC AGATGCGCTT GTCTCTGGAC GGCGAGGAAC TCGGCCGGAC CGACGTCGAA GGCACCATCT CGGGGTCGCA ATACGACCTC ACCTTGGGAG AGGGCCGGGG GCGCAGCGCC GAAGGGGAGA TCGATTACTT CTCGATGACC ACCCCGCCTG CAGGATCGGT GCTTGAGATC GGAGACCGGT TTCCGGAGGA ACCAGAAGAG CCCGAAGAGC TCGAGCCGCC AGTGAGCGAG GAAGAGCCGG AGGAGCCGGT AGCCCCGTCG GTGGCTGAGG AAGAGGAGCC TGAGGGTGTG CTCATTCAGC GCTTTCTCGA AAGCTTCTTT GCTTTCTTCG GCGGACGCCA GGCCACCGAA GACCCAGCGC CGGCCCTTCA AGACGACACC GGCACGATCA CCTTGGAGAA TGTCTCCACC TTCTTCCGGG AGGATCTCGC CGAACAGCGG ATCCCACCGG ACGAAGAAGA TCCCGCCGAG GACGAGAATG ACTTTCTCGC GGCCTAG
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Protein sequence | MSGSSYFKDY TAHQNATILV SSTEELNAAV AELAGTTGGT VLLSGEAGPY RLDARNLGDS AESAVLITSQ DSNNPAQLKQ VYIDNSVYLS LTDVTIDSGD YGFERSGHLH DIYVKSGAHL QFVDLTMTST AEAPLGFDDD TVKAEDAVYL RNASDVLFAD STISNYYHGI SLAGVRDTIV TGNDISALQG DGIRGGGVNN VLVSDNHIHD FLGATNEYNH PDMIQFWTGF PEGMTNTDLT ITGNLLNAGE GSAAQGILVQ NEAFDDAGDP LEGVYGQNLT ITDNVIHSGM SNGIGIIGYQ GVEVANNSVL WNEGAVLSQT ADAVPASNPP WILVRNSLEV ETAGNVAHLV RIETEDQAET NYFLDYDNPS APNYAYAHVI GLAADGQTDV YDLQFRPDSP LNGVSGAEAS TWTPSEAPVN AVISQQPSLE DRAAVELSAR YSTVDGQLVD PETAQVFWTL ADGTVLEGLE VTVTFDTPGL HEVTLDVLAP DGSSDSATRS VDIRGNGLFE ADFARSETFG DGVEIVDPNG EAFSKKGVFT LDGDSVFEVT RGNPEFETLH TLSMDVSFKP DAFEKNGWLV KWLKAVDLRV TDEKGLWLKI ETDADVYEIR TEGNLLEKGE WADIAVDFDS HAGQMRLSLD GEELGRTDVE GTISGSQYDL TLGEGRGRSA EGEIDYFSMT TPPAGSVLEI GDRFPEEPEE PEELEPPVSE EEPEEPVAPS VAEEEEPEGV LIQRFLESFF AFFGGRQATE DPAPALQDDT GTITLENVST FFREDLAEQR IPPDEEDPAE DENDFLAA
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