Gene Dshi_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4122 
Symbol 
ID5714662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp54931 
End bp55707 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID641277024 
Producthypothetical protein 
Protein accessionYP_001542320 
Protein GI159046651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT CTGCGACCGC CCCGCTGGTC TTTCTGCACA TCCCCAAGAC CGCCGGGCAG 
ACCATCCATG AAGAACTGGC CCGCGCCTTG GGCCCGGAGA CCGTCTCGCC GGTGCGCCGC
TACAACCAGG TGGCGGCGGG TGCGCCGCAG ATGCCGCCAG GATACAGTCT CTATTCCGGG
CCGCTCGACT GGGGCGAGAC CGATACCCTG CCGTCCGGGG CCTTCGTCTT CACCGTGCTG
CGCGACCCGT TCGAGCGGCT GGCCTCCTAT TATCTCTATG TGCTGAAAAT GGCCCGGGCC
CGGGCCGACG AGGTGCTCGA ACAGCCCCAG GAGCCGCATC TGCGGGGGCT GCGGCGGATC
CTGACCATGT CCGCGGAAGA GTATTTCTTC GGTGGCGATG CGGCCTGGCA GGGGTTCATC
CGGGCCCATT ACGACAATTT CTATACCTCC TATTTCGCCA CGCGGCGGAT GCTGGGCTGG
CGCGAGGTCC AGGCGCTGGA CGAGGAGACC GCCTTGCAGG CGGCCCTGTC CAACGTGCCG
CGGATGAGCC GGATCTACTC GATCCGGGAG CTGGGTGCGC TGGAGGCGGA CATGGCCGCC
CGGGGGCTGG AGATCTCGGT GACCGAGACC TTCCGCCGGG CCACGGATGA CGCCCACCAG
GAGCGCCGCT GGCCGATGCT TGCGGCCCGG TTCGAGAGCG ATGCGGGCAT CCGGCGGCTG
GAGGCTTTCG CAGTGCGCGA CGAGCTGCTG CTGTCGGAGC TGGGGCTCAG GGTGTGA
 
Protein sequence
MSVSATAPLV FLHIPKTAGQ TIHEELARAL GPETVSPVRR YNQVAAGAPQ MPPGYSLYSG 
PLDWGETDTL PSGAFVFTVL RDPFERLASY YLYVLKMARA RADEVLEQPQ EPHLRGLRRI
LTMSAEEYFF GGDAAWQGFI RAHYDNFYTS YFATRRMLGW REVQALDEET ALQAALSNVP
RMSRIYSIRE LGALEADMAA RGLEISVTET FRRATDDAHQ ERRWPMLAAR FESDAGIRRL
EAFAVRDELL LSELGLRV