| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4121 |
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| Symbol | |
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| ID | 5714667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 52382 |
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| End bp | 54934 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641277023 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001542319 |
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| Protein GI | 159046650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.276059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAACGCC TCAAGGGGGT ATTCCATCGC TATGCGGATC GCCATCTGAC GCTGGATCTG
CCGGGTTTTT CCCTCGGGGA GCCCGTCGAA GAAGGTCAGC CCCTGGGGCA TGTGGACCTC
GTGGCGGCGC GGGGTAATCG GCTGCGTGTG GTGGGCTGGA GCACCGCGGA TCGGATCACC
CTGAGCTGGA ACGGAGGGCA GGCCAGCTGC CGCCCGCATA TCCCGCGCGA GGATGTGGCC
AACGCCCTGG GCTTGGGGCG GTATGTCGGG TTCGAATTAG ACGCGCCGCT GGAGGCCTTT
CCTTATCTGT TGACCCTCGA TCACGGAGGC GGGCGTGCCG AGCTGCCCCT TGCCGGGATG
AGCCTGGAGG CCCTGCGGCG CGCCCGGGGC CGTTTGCGGT GGCGGTTTCT GGGCAAGCTG
ATGGTCATGT CGCCCCTGCT GGGCCGCTAT GTCCTGCGCC GTGACCCGGT CACCCGGGAC
CGGATCAAGC GGGCGCTTTC GCTGGAGGCG GTGCCCCGGG CCGGGCCGAT GGAGACTGCG
CTCTTCACCT TCGCCGAGGG CGAGGAGTTG GCCTTTCCCA CGGACCTGCC GATCACCGTG
GTGATGCCAG TCTACAATGC GCTGGATCTG ACCCGGGCCG CGTTGGCGCG GGTGGCCGAG
CACACGGATC TGCCCTGGCA CGCCATCGTG ATCGAGGATT GTTCCACCGA CCCGGAGGTT
CGGCCTTGGC TGCGCGGCTG GGCCACGGCC CAGAACGCGG CCCAGCCCGG GCGTGTGAGC
TTGCTGGAAA ACGAGACCAA CCTGGGCTTC ATCGACTCGG TCAATCGCGG CTTTGCCGCC
GCCCTGGAGC GCGGGCATCA CGTGGTGCTG CTGAACTCCG ACGCGCTGGT GCCGCCGGGC
TGGGCGTCGC GGCTCCTGCG GCCCATGGTG GTCCATGACA ACGTGGCCAG CGTCACGCCC
ATGTCCAACG ACGCGGAGAT CTTCTCCAGC CCGGTGATCT GTGCGCGCAG CATGCTGGCG
CCGGGCGAGG CCGAGGCGGT GGACGCGGTG GCGCGCGGCT TTCATCCCGA GGCGACCCTG
TCGGTGGCGC CCACCGGGGT GGGGTTCTGC ATGGCCATGC ATATCGACTG GCTGCGTCGG
TTCCCGACGC TCGATCCGGT GTTCGGGCGC GGTTATGGCG AGGAGGTCGA CTGGTGTCAG
AAGGTGCGCG CCCGTGGCGG GCGGCACCTG GGCCTGCCTG GGCTTTACGT GGAGCATCGG
GGCGGCGAGA GCTTCGGGTC CGAGGAGAAG CAGCGGCTCA TTCACACCAA CAACCAGATC
GTCGCCAAGC GCTACCCGAG CTATGACCGG GAGGTGCAGG GCTTTATCGC GGCCGATCCG
CTGATCACGC CCCGGGTGGC CTTGGCGGTC GGGCTGGTGG CGGCGCGGGC CCGGGCGGCG
GAGGCGGCCC TGCCCATCTA CCTGGCCCAT TCCCTGGGCG GCGGGGCCGA AGACGACCTG
GCGCGCCGGG TGGCCGAGGA TGTGGATCGG ATCGGCGGGG CAGTGATCCT GCGGGTTGGC
GGGCCGCAAC GCTGGCAGGT CGAGGTGGTT ACCCCTGCTG GCCAGGTCGC CGGCGGGACC
GACGAGTTCG GCTTCGTGCA GGCGCTGCTG GCGCCCGTGG GTGCGCGGCG GCTGATCTAT
TCCTGCGGGG TGGGGGATGC GGACCCGGCG GAGCTGCCGG CGCTGCTGCT GTCACTGCGC
AAGTTCGCCA TGCGCGACCC GGTCGAGGTG CTGGTGCATG ACTATTTCCC CCTGAGCCCG
TCCTACTGTC TGCTGGACAG CGACCATGTG TTCCGCGGGC TGCCGCCGCT GGACACCGCC
GATCCGGCCC ATGGAATTGC CCGCCCGGAC CAGGGGCTTC TGGATCTGGC GGGCTGGCGC
GCGGCCTGGG GGCCGCTGAT GACCGCGGCA CGCGAGATCA CGGTCTTTTC CGAAAGTAGC
CGGGACCTGG TCGCAGAAGC CTACCCGGCG GCCCGGGCGG CGATCCGCGT CCGGCCCCAC
CGTTTGCTGA ACGAGGTGCC GCGCATCCCC GTGCCGGGGC CCGACGCGGC CCCCGTGGTC
GGAGTGCTCG GCAATATCGG GGTGCAGAAG GGGGCCCAGC TGGTGCAGGA CATGGCCCGC
ACCCTTCATG GCAGCGGCGC GCGGCCGACC GATCCGGGCC TGGTCCTGAT CGGCAATATC
GACCCGGCCT TCGGGCTGCC CGAGGGAATG GCGGTCCATG GCACCTACCG GATCGCGGAT
CTGGCGCAGA TCGTCGGGAA ATACGGCATC ACCTGCTGGC TGATCCCCTC GGTCTGGCCC
GAGACCTTCT CCTTCACCAC CCATGAGGCG CTGGCCAGTG GCCTGCCGGT CTATGCCTTC
GATCTCGGCG CCCAGGGGGC GGCCGTGGCG GCGGCCGGGA ACGGTCGGGT CATCCCCTTC
GATCCCGATG CCGATCCGGC CCGGACGGTG CTGGAGCGGT TGCGGGCGGA TCTGGGTATT
GCCGCAGGAC ATGTGGCGCC GGTTTCTGCA TGA
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| Protein sequence | MQRLKGVFHR YADRHLTLDL PGFSLGEPVE EGQPLGHVDL VAARGNRLRV VGWSTADRIT
LSWNGGQASC RPHIPREDVA NALGLGRYVG FELDAPLEAF PYLLTLDHGG GRAELPLAGM
SLEALRRARG RLRWRFLGKL MVMSPLLGRY VLRRDPVTRD RIKRALSLEA VPRAGPMETA
LFTFAEGEEL AFPTDLPITV VMPVYNALDL TRAALARVAE HTDLPWHAIV IEDCSTDPEV
RPWLRGWATA QNAAQPGRVS LLENETNLGF IDSVNRGFAA ALERGHHVVL LNSDALVPPG
WASRLLRPMV VHDNVASVTP MSNDAEIFSS PVICARSMLA PGEAEAVDAV ARGFHPEATL
SVAPTGVGFC MAMHIDWLRR FPTLDPVFGR GYGEEVDWCQ KVRARGGRHL GLPGLYVEHR
GGESFGSEEK QRLIHTNNQI VAKRYPSYDR EVQGFIAADP LITPRVALAV GLVAARARAA
EAALPIYLAH SLGGGAEDDL ARRVAEDVDR IGGAVILRVG GPQRWQVEVV TPAGQVAGGT
DEFGFVQALL APVGARRLIY SCGVGDADPA ELPALLLSLR KFAMRDPVEV LVHDYFPLSP
SYCLLDSDHV FRGLPPLDTA DPAHGIARPD QGLLDLAGWR AAWGPLMTAA REITVFSESS
RDLVAEAYPA ARAAIRVRPH RLLNEVPRIP VPGPDAAPVV GVLGNIGVQK GAQLVQDMAR
TLHGSGARPT DPGLVLIGNI DPAFGLPEGM AVHGTYRIAD LAQIVGKYGI TCWLIPSVWP
ETFSFTTHEA LASGLPVYAF DLGAQGAAVA AAGNGRVIPF DPDADPARTV LERLRADLGI
AAGHVAPVSA
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