| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4118 |
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| Symbol | |
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| ID | 5714605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 49744 |
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| End bp | 50616 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641277020 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001542316 |
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| Protein GI | 159046647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00952178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC GCAAAGGCAT CATTCTGGCG GGGGGCTCCG GCACGCGGCT CTACCCGATC
ACCATCGGGG TGTCGAAGCA GCTTCTGCCG ATCTATGACA AGCCGATGAT CTATTACCCG
ATCAGCGTGC TGATGCTGGC CGGGATCCGC GAGATCGCGA TCATCACCAC CCCCGAGGAC
CAGGCCCAGT TCCAGCGCGC CATCGGCGAT GGCAGCCAGT GGGGGGTGTC GTTTACCTTC
ATCGTGCAGC CCAGCCCCGA CGGGCTGGCC CAGGCCTATA TCCTGGCCGA GGACTTCCTG
AATGGCGCGC CCTCGGCCAT GGTGCTGGGC GACAACATCT TCTTCGGGCA CGGGCTGCCG
GACATCATGG CCGAGGCCGA CGCCCAGACC GCGGGCGGCA CGGTGTTCGG CTACCACGTG
GCCGATCCCG AGCGTTATGG GGTGGTGGCC TTCGACAGCG CGGGGTCGGT CAAGCAGATC
ATCGAGAAGC CCGAGGTGCC GCCGTCGAAT TACGCGGTGA CGGGGCTTTA TTTCCTCGAC
GGCTCGGCGC CGGAGCGGGC GCGCAAGGTG CAGCCGAGCG CCCGGGGCGA GTTGGAGATC
ACCACGCTGC TGGAGATGTA CCTGGCCGAC GGGCTGCTGA GCGTCAAACG GATGGGGCGG
GGCTATGCCT GGCTCGACAC CGGGACCCAT GGCAGCCTGC TGGATGCGGG GAATTTCGTC
CGCACCCTGG AGCGGCGGCA GGGGCTGCAG ACCGGCAGCC CGGACGAGAT CGCCTACGAC
AAGGGCTGGA TCAGCGCCGA GGCGCTGCAG GCCCGGGCGG AGAAGTTCCG CAAGAACAAT
TACGGCGAAT ACCTGGGCCA GCTGTTGAAA TAG
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| Protein sequence | MTQRKGIILA GGSGTRLYPI TIGVSKQLLP IYDKPMIYYP ISVLMLAGIR EIAIITTPED
QAQFQRAIGD GSQWGVSFTF IVQPSPDGLA QAYILAEDFL NGAPSAMVLG DNIFFGHGLP
DIMAEADAQT AGGTVFGYHV ADPERYGVVA FDSAGSVKQI IEKPEVPPSN YAVTGLYFLD
GSAPERARKV QPSARGELEI TTLLEMYLAD GLLSVKRMGR GYAWLDTGTH GSLLDAGNFV
RTLERRQGLQ TGSPDEIAYD KGWISAEALQ ARAEKFRKNN YGEYLGQLLK
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