| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4117 |
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| Symbol | |
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| ID | 5714607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 48852 |
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| End bp | 49709 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641277019 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001542315 |
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| Protein GI | 159046646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00851806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCG TTTTCGGACA GACGGGCCAG GTGGCCCGCG AACTGGCGGC GCGGGTGCCG
GAGGCGCTGT TTCTGGGGCG CGATGCGGCG GATCTGTCGG ACCCCGACGC CTGTGCCGCC
GCCCTGCGCG CCGCGGCGCC GTCGGCGGTG ATCAATGCGG CTGCCTACAC GGCCGTGGAC
CGGGCCGAGG CGGAAGAGGA TCTCGCCACG CGCATCAACG GGGCGGCCCC GGGGGCCATG
GCGGTCGCGG CGGCGGAGCT TGGCGTGCCG TTCGTGCATA TCTCGACCGA TTACGTGTTC
GACGGGGCGG GCACCGCGCC CTTCGCGCCG GACGCGCCCG TGGGGCCTCT GGGGGCTTAC
GGGCGATCGA AGCTGGCCGG GGAAGAGGCC GTGCGCGCCG TGGGCGGGGT GCACGCGATC
CTGCGCACCT CCTGGGTGGT CTCGGCCCAT GGCGGCAATT TCGTCAAGAC CATGCTGCGG
CTCGGGGCCG AGCGCGACAG CCTGAGCATC GTGGCCGACC AGGTGGGCGG GCCCACGGCG
GCGGGCGATA TCGCGGCGGC CTGCCTGAAG ATCGCGGCAC GGCTGGCCGC CGATCCGGGC
AAGTCGGGGA CCTATCATTT CGCGGGTGCC CCGGATGTGA GCTGGGCCGA TTTCGCGCGC
GAGATCTTCG GCCAGGCGGG GCTGGACTGC GCGGTCACGG ATATCCCCTC GGCGGCCTAT
CCCACGCCCG CCCGGCGACC GCACAACTCG CGCCTGGACT GTTCCAGCCT GCAGGCGGCC
TTTGGCATCG CGCGGCCCGA CTGGGCCGAG AGCCTGAGCG GGATCCTGCG CGATCTCGGC
CACACCCCCC GCCCGTAA
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| Protein sequence | MILVFGQTGQ VARELAARVP EALFLGRDAA DLSDPDACAA ALRAAAPSAV INAAAYTAVD
RAEAEEDLAT RINGAAPGAM AVAAAELGVP FVHISTDYVF DGAGTAPFAP DAPVGPLGAY
GRSKLAGEEA VRAVGGVHAI LRTSWVVSAH GGNFVKTMLR LGAERDSLSI VADQVGGPTA
AGDIAAACLK IAARLAADPG KSGTYHFAGA PDVSWADFAR EIFGQAGLDC AVTDIPSAAY
PTPARRPHNS RLDCSSLQAA FGIARPDWAE SLSGILRDLG HTPRP
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