| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4115 |
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| Symbol | |
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| ID | 5714616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 46978 |
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| End bp | 48018 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641277017 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001542313 |
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| Protein GI | 159046644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0560376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC TGGTGACCGG CGGGGCCGGG TTCATTGGCT CGGCGGTGGT GCGCCAGGCG
ATCCGCGACG GGCACCAGGT GGTGAACCTC GACGCGCTGA CCTATGCGGC GTGCCTCGAC
AACGTGGCCA GCGTGGCGGA CAGCCCGGCT TACGCATTCG AGCATGTGGA TATCCGCGAC
CGCGCCGCGC TGGACCGGGT GTTCGCGACC CATGCGCCGG ATGCGGTGAT GCATCTGGCC
GCGGAATCCC ATGTGGACCG GTCCATCGAC GGGCCGGGCG ATTTCATCGA GACCAACATC
ACCGGCACCT ACAACATGCT GGAGGCGGCG CGCAGCCATT GGGTGGGGCA GGGGCGGCCG
GAGGATTTCC GGTTCCACCA TATCTCCACC GACGAGGTGT TCGGATCCCT GGGCCCCACG
GGGCAGTTCA CCGAAGAGAC ACCTTATGAC CCGCGCAGCC CCTATTCGGC CTCCAAGGCG
GCGTCCGATC ATCTGGTGCG CGCCTGGCAC GAGACCTACG GGCTGCCGGT GGTGATGACC
AACTGCTCGA ACAATTACGG CCCCTTCCAT TTCCCCGAGA AGCTGGTGCC GGTGATCATC
CTCAAGGCGC TCGCCGGAGA GCCCCTGCCG ATCTATGGCG ACGGGTCGAA CGTGCGCGAC
TGGCTCTATG TGGAGGATCA CGCCGATGCG CTCCTCCTGG TGGTCCAGAA GGGCGTGGTC
GGCCGGTCCT ACAATATCGG CGGGGAGAAC GAGCGTACCA ACCTGCAGCT GGTGCAGACC
CTGTGCGGGA TCCTCGATGA GTTGCGCCCG GGGCCGCGGC CTTATGCCGA GCAGATCAGC
TTCGTCACCG ACCGGCCCGG GCATGACGCG CGCTACGCGA TCGACCCCAC CCGGATCGCC
ACGGAACTGG GCTGGCGCCC GTCGGTCACG GTCGAGGAGG GGCTGCGCCG CACCGTGCAG
TGGTATCTCG ACAACGAGGC CTGGTGGCGC GCGCTGCAGG ATCGCGACGG GGTCGGGCGG
CGGTTGGGCA AGGCGGGCTG A
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| Protein sequence | MKLLVTGGAG FIGSAVVRQA IRDGHQVVNL DALTYAACLD NVASVADSPA YAFEHVDIRD
RAALDRVFAT HAPDAVMHLA AESHVDRSID GPGDFIETNI TGTYNMLEAA RSHWVGQGRP
EDFRFHHIST DEVFGSLGPT GQFTEETPYD PRSPYSASKA ASDHLVRAWH ETYGLPVVMT
NCSNNYGPFH FPEKLVPVII LKALAGEPLP IYGDGSNVRD WLYVEDHADA LLLVVQKGVV
GRSYNIGGEN ERTNLQLVQT LCGILDELRP GPRPYAEQIS FVTDRPGHDA RYAIDPTRIA
TELGWRPSVT VEEGLRRTVQ WYLDNEAWWR ALQDRDGVGR RLGKAG
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