| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4114 |
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| Symbol | |
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| ID | 5714622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 46419 |
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| End bp | 46973 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641277016 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001542312 |
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| Protein GI | 159046643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00581959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATCG AAGACACCCC CCTTCCCGGC GTGAAGCTCC TGACCCCGGC GCGGTTCGGC
GATGCGCGGG GGTTCTTCTC CGAAAGTTAC TCGCGCCGGG TGCTGGCCGG GCATGGCATC
ACGCTGGATT TCGTGCAGGA CAACCATTCG CTCTCGGCGC AGGTGGGCAC GGTCCGGGGG
TTGCATTTCC AGGCGCCCCC CCATGCCCAG GACAAGCTCG TGCGCTGCGG GCGGGGGCGG
CTGTTCGACG TGGCGGTGGA TGTGCGCCGG GGCAGCCCGA CCTACGGGCA GTGGTTCGGC
GCCGAGTTGA GTTTCGAGAA CGGCAAGCAG CTGCTGGTGC CGGCGGGGTT CCTGCATGGC
TTCGTCACCC GGGAGCCCGA TACGGAGATT GTCTACAAGT GCAGCGACTA CTATGCGCCC
GAGTGCGATG GGGCCGTGCA TTGGGACAGT TGCGGCATCG ACTGGGGCTT CGAGGGCGAT
CCGGTGATCT CCGCCAAGGA TGCCGCCGCC GTGCGGCTCG CCGATTTCGA CAGTCCGTTC
GTCTACGAGG GATAA
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| Protein sequence | MQIEDTPLPG VKLLTPARFG DARGFFSESY SRRVLAGHGI TLDFVQDNHS LSAQVGTVRG
LHFQAPPHAQ DKLVRCGRGR LFDVAVDVRR GSPTYGQWFG AELSFENGKQ LLVPAGFLHG
FVTREPDTEI VYKCSDYYAP ECDGAVHWDS CGIDWGFEGD PVISAKDAAA VRLADFDSPF
VYEG
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