| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4092 |
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| Symbol | |
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| ID | 5714644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | - |
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| Start bp | 24188 |
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| End bp | 25219 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276999 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001542295 |
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| Protein GI | 159046626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.293783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTGT TTGTCGGCTT GGATGTATCG CTGGAGAAGA CTGCGATCTG CGTGATCAGC
GAGCATGGAA AGATCGTTAG GGAGGCGCAG GTCATCAGCG AGCCCGAGGC GCTCGCGCGG
TGGATCGAAG AGCAGTCCGG CAGCATCGCT GCCGTCGGTC TCGAGGCCGG ACCACTGTCG
CAGTGGCTGC ATCGGGGCCT CTCGGCCGCG GGCCTGGACG TGGTGCTTAT GGAAACGCGC
CGGGTAAAGA GCGCCCTGAA GGCGATGCCG ATCAAGACGG ACCGGAGGGA TGCCGAGGGC
ATCGCGCGTT TGCTTCACCT CGGGTGGTTC CGGCCGGTCC ATTGCAAGTC CGTCTCGGCG
CAGGAAGTCC GCGCCCTGCT GGCGGCACGC AAAGCGGTCC AGCAGGGCAT GATCGCGCTG
GAGATGTCTC TGCGCGGCCT GCTGCGGAAC TTCGGCCTGA AGGTGGGCGC CATCTCCCGA
GGCCGTTTCG AACACCGCAT TCGGGAACTG GCGACAGGAA ATGCGATGCT GGAAGCGGCG
ACCGAGCCGA TGCTGCGTGC CCGCGCCGCC CTGCGACAGG AATTGGCTGG ACTCGAGCGG
CACGTTCGCG GATTGGCCCA AGAAGATGAA GTGTGTCAGC GCCTGATGTC CATGCCCGGT
ATCGGCGCGG TCGTGGCGTT GACGTTCCGC TCCGCCGTGG ACGACCCGTC CCGGTTCAGT
TCCTCAAAGA AAGTGGGCCC CTGGGCCGGC CTGACACCGT CGCGCAATCA ATCCGGCGAA
CGCGATGTCT CAGGCGGCAT AACGAAGGCG GGCGATGCCA ATCTGCGCCG CGCCTTGTGT
CAGGCCGCGA CCGTCATGAT GAACCGCGGC CCTTCTACAT GGCTGAGAAC CTGGGCCGAG
CGCGTCGCCC GCCGCAGGGG CCGAAAGTGT GCCATGGTCG CGCTTGCGCG CCGCATCGCC
GTTGTTCTTC ACCGGATGTG GCGTGACGAA ACCGCATTCC AAGCGGGGGC GCCAATCAGC
CATGCGGCAT GA
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| Protein sequence | MRLFVGLDVS LEKTAICVIS EHGKIVREAQ VISEPEALAR WIEEQSGSIA AVGLEAGPLS
QWLHRGLSAA GLDVVLMETR RVKSALKAMP IKTDRRDAEG IARLLHLGWF RPVHCKSVSA
QEVRALLAAR KAVQQGMIAL EMSLRGLLRN FGLKVGAISR GRFEHRIREL ATGNAMLEAA
TEPMLRARAA LRQELAGLER HVRGLAQEDE VCQRLMSMPG IGAVVALTFR SAVDDPSRFS
SSKKVGPWAG LTPSRNQSGE RDVSGGITKA GDANLRRALC QAATVMMNRG PSTWLRTWAE
RVARRRGRKC AMVALARRIA VVLHRMWRDE TAFQAGAPIS HAA
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