| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4090 |
|---|
| Symbol | |
|---|
| ID | 5714634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009958 |
|---|
| Strand | - |
|---|
| Start bp | 22245 |
|---|
| End bp | 22511 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641276997 |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | YP_001542293 |
|---|
| Protein GI | 159046624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.702583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.16367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAT CAAGGTTCAC GGAAGAGCAG ATCATCGGGA TGCTGAAGGA GCAGGAGGCC
GGAATGACGA CGGCCGATGT CTGCCGCAAG CACGGGGTCA GCACGGCAAC GTTTTACAAA
TACAAGGCGC GGTTCGGCGG CCTCGAGGTA TCGGACGCGC GCCGACTGAG GGCGCTCGAG
GACGAGAACG CCAAGCTGAA GAAGCTGCTG GCCGAAGCGA TGCTCGACAA TGCGATACTG
AAGGATGTCA CTTCGCGAAA GTGGTAG
|
|---|
| Protein sequence | MKRSRFTEEQ IIGMLKEQEA GMTTADVCRK HGVSTATFYK YKARFGGLEV SDARRLRALE
DENAKLKKLL AEAMLDNAIL KDVTSRKW
|
|---|
| |