| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4089 |
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| Symbol | |
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| ID | 5714659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | - |
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| Start bp | 21412 |
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| End bp | 22221 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641276996 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001542292 |
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| Protein GI | 159046623 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.805064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.114736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACACG TTGTGGAAGT CCACGGAGTG AGCCAGCGAC GGGCGGGCAA GGCACTGGCC
GTGGATCGGT CGAGCGTGCG CTATCGCAGC GTGCGGCCTG ACGATGCCGA AGCGAGGGCC
GCCATGAAGG CTGTCGCGGC CGAGAGGCGG CGGTTTGGCT ATCGCCGCAT CCACGTGATG
CTGGAACGGC AGGGGATCAT GATGAACCTG AAGAAGCTCA GGCGGCTCTA TCGCGAGGAG
AAGCTCCAAG TGCGCCGCCG GGGCGGCCGA AAGCGGGCTC TGGGGACACG CTGGCCGATG
CTGGTGCCAG ATGCCCCCAA CCAGCACTGG AGCCTGGACT TCGTCAGCGA TGCGCTGACG
GATGGCAGAC AGTTCCGCGT TCTGGCCGTG GTCGACGACT ACAGCCGGGA GTGCCTGGCC
TTGGTGGCGG ACACGTCGCT CTCTGGCCTG CGCGTCGTGC GCGAGCTCGA TGCGTTGATG
TTGCGCCGCG GCCAGCCTGC AATGGTGGTT TCGGACAATG GAACGGAACT GACCTCGGTG
GCTGTCCTGA GCTGGTGCCA GCGCACGGGC ATCGAATGGC ACTACATCGC GCCAGGAAAG
CCCATGCAGA ATGGCTTCGT CGAAAGCTTC AACGGACGCT TCCGGGACGA GCTTCTCAAC
GAGTCGCTAT TCTCGTCTCT GGCCGATGCC CGCGAGCAGA TCCGGGCATG GCAGCACGAC
TACAACCACC ATCGCCCTCA CTCAGGACTG GGGAACATTC CGCCCGTCGA GTTCGTGGCA
AAGAAGGGGC TGGAAATGCG CGCCGCGTAG
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| Protein sequence | MAHVVEVHGV SQRRAGKALA VDRSSVRYRS VRPDDAEARA AMKAVAAERR RFGYRRIHVM
LERQGIMMNL KKLRRLYREE KLQVRRRGGR KRALGTRWPM LVPDAPNQHW SLDFVSDALT
DGRQFRVLAV VDDYSRECLA LVADTSLSGL RVVRELDALM LRRGQPAMVV SDNGTELTSV
AVLSWCQRTG IEWHYIAPGK PMQNGFVESF NGRFRDELLN ESLFSSLADA REQIRAWQHD
YNHHRPHSGL GNIPPVEFVA KKGLEMRAA
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