Gene Dshi_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4088 
Symbol 
ID5714643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp20858 
End bp21250 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID641276995 
Producthypothetical protein 
Protein accessionYP_001542291 
Protein GI159046622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.161026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0622894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG ACCCGACAAA TCATGGGTTT CTGAAGCTCG ACTTCACTTT CCCCAGCAAT 
GTCGCCGTTT ATGAACGTGA GCTTGAGGGG ATAGACCAAA GCGCACACGA CCAGATGCGT
CTGAATTGCT ACCTATCTCA GGATGGGGAT TTCGTGACCG TTTGGGACGG CCTGATCGAC
GCGTATGTGA CCGGGATCAG CCTGGGTTTT GGCGACGATG CATCGTTCGA TTTTGCTGAA
CAGTACGAAG AAACCCTCTT TCGCGGCTAC ATAAGCAACG ACGACGAAGG CGCTGTGATA
CTAAGCGCCC TACGGCTGGA GCAAAGAATC CCAAATATCC TGGTCGTCCC GACAAAAGGA
CGGCTGGAGT GCCACATGCT GAAGGTGGGT TAG
 
Protein sequence
MSFDPTNHGF LKLDFTFPSN VAVYERELEG IDQSAHDQMR LNCYLSQDGD FVTVWDGLID 
AYVTGISLGF GDDASFDFAE QYEETLFRGY ISNDDEGAVI LSALRLEQRI PNILVVPTKG
RLECHMLKVG