Gene Dshi_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4087 
Symbol 
ID5714633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp20559 
End bp20852 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content51% 
IMG OID641276994 
Productplasmid stabilization system protein 
Protein accessionYP_001542290 
Protein GI159046621 
COG category[R] General function prediction only 
COG ID[COG3668] Plasmid stabilization system protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0590429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACTT ATAGGCTTTC GGAAGAGGCA AAAGATGACC TGATCGGCAT TCATCAGTAT 
GGCGTTAGAA AACACGGCGA AGCACAAGCC GATGCCTATT TTTGGCAGAT CATCGAAAGG
TTGGAAGTGT TGGGTGAGAC CCCCCTGCTC TACCAGGAAG TGCCGGAAAT TCGCGAAGGA
TACCGGCGCA GCGTCTGCGG GAAGCATTCG ATCTACTACA CGCTAGATGG TGATGACGTA
GAGATCATGG CCATATTGAG ATCGCAGGAT CCAACTCTGC GTTTTGGACG ATAG
 
Protein sequence
MGTYRLSEEA KDDLIGIHQY GVRKHGEAQA DAYFWQIIER LEVLGETPLL YQEVPEIREG 
YRRSVCGKHS IYYTLDGDDV EIMAILRSQD PTLRFGR