Gene Dshi_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4084 
Symbol 
ID5714647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp19415 
End bp19981 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content64% 
IMG OID641276991 
Productresolvase domain-containing protein 
Protein accessionYP_001542287 
Protein GI159046618 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.236689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0346573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAG GCTATGCCCG CGTATCGACC GACGACCAGG CCACCGCCGC GCAGCTCGAC 
GCGTTGCGCG CGGTTGGCTG TGAGCGCGTG TTCGAGGAAC GCGCGTCCGG CGGTCGATGG
GATCGGCCGG AGCTTCATAG GATGCTCGAT CAGCTACGCG ACGGCGACGT AGTGATCGTC
TGGAAGCTGG ACCGGCTGTC CCGGTCCCTG AAAGACCTTC TGTCAATCAT GGAGAAGATC
GACGCGGCGG GCGCTGGATT CCGGTCCCTG ACCGAAGCCA TCGACACGAC TACGCCCGCC
GGGCGCATGA TGATGCAGAT GGTGGGCGTT TTTGCAGAGT TCGAACGCGA AATGATCCGC
GAACGTACCC GCGCCGGTCT GGAGCGCGCC CGCAAGAAAG GACGCCACCC AGGGCGCAAA
CCGAAGCTGT CTGACGATCA GCGCCAGGAA ATCCGGGATA TGGTGCGGTC GGGCAAGCGC
ACGGAGGCCC AGGCCGCACG GCTTTTTGGC GTTCATCGCT CCACGATCAG CCGCGTCATG
CGGGAGGCAT CCGATGCAGC AGCTTGA
 
Protein sequence
MNLGYARVST DDQATAAQLD ALRAVGCERV FEERASGGRW DRPELHRMLD QLRDGDVVIV 
WKLDRLSRSL KDLLSIMEKI DAAGAGFRSL TEAIDTTTPA GRMMMQMVGV FAEFEREMIR
ERTRAGLERA RKKGRHPGRK PKLSDDQRQE IRDMVRSGKR TEAQAARLFG VHRSTISRVM
REASDAAA