| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4077 |
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| Symbol | |
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| ID | 5714615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 10862 |
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| End bp | 11521 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276984 |
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| Product | ABC transporter related |
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| Protein accession | YP_001542280 |
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| Protein GI | 159046611 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0433978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGT TCGAGAACCT CACCAAGCGT TTCGTGGTCA AGGGCTACGT CAAGACGGTG
ATGGAGAATG TTTCCCTCAC CATCCCCTCG AAGACCTCCG TGGCGCTTCT GGGGCGCAAC
GGGGCGGGCA AATCGACCCT TCTGAAGATG ATCGCAGGCA CGGTCGACCC GACCTCGGGG
GAGATCCTGT CCAGTGGCAC GATCTCCTGG CCCGTCGGCT TCGCCGGCTC GTTCCATCCG
GACATGACCG GCGCTCAGAA CACCAAGTTC CTGGCCCGGG TCTATGGCAT CGACACCCAA
GCCCTGACCG ATTTCGTGGA GGATTTCGCC GAGCTGGGCG ACCACTTCCG CCAGCCCTTC
CGCAGCTATT CCTCGGGCAT GAAATCGCGG CTCGCCTTCG GTATCTCCAT GGGGATCAAG
TTCGACACCT ACCTGGTCGA CGAGGTAACG GCGGTGGGCG ATGCGGCCTT CAAGAAGAAG
GCGAGCGCGA TGTTTCAGGA CCGTATGGCC GATGCCGGCG CGGTCTTCGT GAGCCACTCC
ATGGGCCATG TGCGCGAGAT GTGCGATGTG GGCATCGTGA TCGAGAACGG GCAGCTGACC
TACCATGAAG ACATTCACGA GGCCATCGCC CATCACGAAA GCAACATGAA GTTGCGCTGA
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| Protein sequence | MIRFENLTKR FVVKGYVKTV MENVSLTIPS KTSVALLGRN GAGKSTLLKM IAGTVDPTSG
EILSSGTISW PVGFAGSFHP DMTGAQNTKF LARVYGIDTQ ALTDFVEDFA ELGDHFRQPF
RSYSSGMKSR LAFGISMGIK FDTYLVDEVT AVGDAAFKKK ASAMFQDRMA DAGAVFVSHS
MGHVREMCDV GIVIENGQLT YHEDIHEAIA HHESNMKLR
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