| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4052 |
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| Symbol | |
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| ID | 5714581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | + |
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| Start bp | 112312 |
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| End bp | 112878 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276964 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001542260 |
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| Protein GI | 159046590 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.491503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC TCATTGCCGG GCTGCCGTTT ATTGCGGCGG TCATATTCGG TGGGTTTTTT
CTCTGGGGGC TCAATCCCGA CCGGGATCCC AACGAGATCC CTTCCGTCCT GATCTCGCAA
CCGGCCCCGG CGTTCGACCT CGATCCCGTG CCGGGGTTGG AGACACCCGG CCTGGCCCGA
AGCGATCTTG TCGGCAACGA ACGACCGGTC GTGGTCAATG TCTTTGCGTC CTGGTGCGTG
CCCTGCCGCG CGGAACATGC CGTGTTGACA AGATTTGTCG AACGAGACGG CATGCGGTTG
TTCGGAATAA ACTACAAAGA CAAACCTGAG GATGCCGTGA AGTGGCTCAA TGACCTCGGC
AATCCCTACG AGCGGATCGG GTCCGACCTG TCGGGCCGGA CCGGGATCGA ATGGGGCCTG
TCGGGCGTGC CGGAAACCTT CATCGTCGAT AGCGATGGCA CCGTTTTGTT TCGCTATGTC
GGGCCGGTCG TGGGTCCGGA CGCCGTCGAA CGGTTCACGC AAGCCCTGAA GCAGGCAGGC
GCACTGCCAA ATGGAGCAGG TTCATGA
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| Protein sequence | MKRLIAGLPF IAAVIFGGFF LWGLNPDRDP NEIPSVLISQ PAPAFDLDPV PGLETPGLAR
SDLVGNERPV VVNVFASWCV PCRAEHAVLT RFVERDGMRL FGINYKDKPE DAVKWLNDLG
NPYERIGSDL SGRTGIEWGL SGVPETFIVD SDGTVLFRYV GPVVGPDAVE RFTQALKQAG
ALPNGAGS
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