| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4048 |
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| Symbol | |
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| ID | 5714577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | + |
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| Start bp | 107808 |
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| End bp | 108530 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641276960 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001542256 |
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| Protein GI | 159046586 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.507063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCGC CACCTCATAT CCTTATCGTG GACGACCACG CTCAGATACG CGAAAGCGTC
GCGCGCTTCC TGGAGAAGAA CGGAATGCGC ACGACCGTCG CCAGGGATGC CGTGGAGATG
GATGCCAAGC TGGCCACTGG TCACTTCGAC CTCCTCGTGC TCGATGTCAT GATGCCGGGC
GAGGACGGTT TGTCGGTTTG CCGCAGACTT GCGCCAGAGG GTGATCTTCC GATCATCATG
CTGACGGCGC TTGGTGAGGA AACGGATCGG ATCGTGGGTC TGGAAATCGG TGCGGACGAT
TATCTCGCCA AGCCGTTCAA TCCACGAGAA CTGCTCGCCC GCATCAAGTC GGTTCTTCGG
AGAAGCAACC GCGACGAACC TGTGGCCGGA AGCCTCGCTG GGAGGAAAGT CTCTTTTGCG
CACTGGATAC TGGATACCGA CCGGCAGGTG CTGATTGACG AGTCCACCAC CGAGACCCCA
TTGACGACCT CCGAGTTCAA ATTGCTGGCG GTCCTGCTGG AACGCGCGAG GATGGTGCTC
AGCCGTGACC AGTTGCTTGA CCTGACCGCT GGTCGGACGG CAGGCCCGAT GGATCGCACC
ATCGACAATC AGATCAGCCG TCTCCGCCGC AAAATCGAGC CGGATGTACT TAGGCCCAGT
GTCATCAAAA CGGTGCGGAA CGGCGGATAC TGTCTGGCTG CCGATGTCGA GGATGCGCCG
TGA
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| Protein sequence | MGPPPHILIV DDHAQIRESV ARFLEKNGMR TTVARDAVEM DAKLATGHFD LLVLDVMMPG
EDGLSVCRRL APEGDLPIIM LTALGEETDR IVGLEIGADD YLAKPFNPRE LLARIKSVLR
RSNRDEPVAG SLAGRKVSFA HWILDTDRQV LIDESTTETP LTTSEFKLLA VLLERARMVL
SRDQLLDLTA GRTAGPMDRT IDNQISRLRR KIEPDVLRPS VIKTVRNGGY CLAADVEDAP
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