Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4041 |
Symbol | |
ID | 5714570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | - |
Start bp | 102989 |
End bp | 103441 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641276953 |
Product | hypothetical protein |
Protein accession | YP_001542249 |
Protein GI | 159046579 |
COG category | [R] General function prediction only |
COG ID | [COG3019] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.613288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAC GACGTACGTT CTTGCTGGCC GGAGCGGCTG CCACACTCCC CCTGCGAGCA CTGGCCAACA CGGAACCGGT CATTAAAGTC CTGAAAACCC CCACCTGCGG ATGCTGCACC GCTTGGGTCG ATCATGTCCG GCAAGCGGGC TTCGCGGTCG AGGCGCAGGA CGTCGATCAG GATGCGCTTT ATGCGTTCAA AGATCGGCTG CAAATTGCAC CGGAACTTGC TGGATGTCAC ACGGCGGTCG TGGGCGACTA TTTTATCGAG GGCCACGTGC CTGCCGCGGA CATCACGCGG CTGCTAGCAG AGCAACCGAT GGCGCGCGGT TTGACTGTCC CCCGCATGCC GATGAGTTCG CCCGGCATGG GCGGTCCCGG GGCCGGTGAC GCTTTTGACA CCTTGCTTGT TGGCTCCGAC GGCGCGACCT CGGTCTTCGC GAGCCACAGC TGA
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Protein sequence | MMKRRTFLLA GAAATLPLRA LANTEPVIKV LKTPTCGCCT AWVDHVRQAG FAVEAQDVDQ DALYAFKDRL QIAPELAGCH TAVVGDYFIE GHVPAADITR LLAEQPMARG LTVPRMPMSS PGMGGPGAGD AFDTLLVGSD GATSVFASHS
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