Gene Dshi_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4038 
Symbol 
ID5714567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp101411 
End bp101941 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID641276950 
ProductISSpo6, transposase OrfB 
Protein accessionYP_001542246 
Protein GI159046576 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAC ATCTGGAAAG GCTGGCTTTC ATCGACGAGA CATCGCTCAA GACGAACATG 
GCCAAGACCA CCGGCTGGGC CCCGCGCGGG CAACGCCTGG TCGATCACGC GCCGTTCGGG 
CATTGGCGCA CCCAGACCTT CATCGGTGCC CTGCGCCATG ATCGCCTCGA TGCCCCGTGG 
GTGATCGATG GCGCAATGAA CGGCGAGTTG TTCGACCTCT ATATCGAGAC CCAGCTGGTG 
CCGACCTTGG GTCCGGGCGA CGTGGTCATC CTCGACAACT TGTCGAGCCA TAAGAGCCCC 
GGCGCAGCCA AGGCCATGCG AGATATCGGC GCGTGGTTCC TGTTCCTGCC GCCCTACAGT 
CCCGACCTCA ACCCGATCGA GATGGCCTTC TCAAAGCTCA AGGTCCTGAT CCGAAAGGCT 
GCAGCCCGAA CCTACCATGA ACTTTGGCAG GCTGTCGGTC ATGTGTGCGA CCTCTTCACC 
GACGAGGAAT GCTACAACTT CTTCAAGGCC GCAGGATATA AAACCGATTA A
 
Protein sequence
MARHLERLAF IDETSLKTNM AKTTGWAPRG QRLVDHAPFG HWRTQTFIGA LRHDRLDAPW 
VIDGAMNGEL FDLYIETQLV PTLGPGDVVI LDNLSSHKSP GAAKAMRDIG AWFLFLPPYS 
PDLNPIEMAF SKLKVLIRKA AARTYHELWQ AVGHVCDLFT DEECYNFFKA AGYKTD