Gene Dshi_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4037 
Symbol 
ID5714566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp100987 
End bp101349 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content63% 
IMG OID641276949 
ProductISSpo6, transposase orf A 
Protein accessionYP_001542245 
Protein GI159046575 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAG CGCATCCTGT TGAGTTGCGT GAACGTGCCG TGCGGCTTGT CGAGCAGGGC 
AACACGCACA CAGAGGCGGC TCGGCGGCTG TGCGTGTCGA TCAAGTTCGT CAACGACATG
GTGCGGCTCA AGCGCGAGAC CGGCTCGCTC GCGCCGAAAC CTCAGGGCAA TCCCGGGCGC
GGCAAACTGA CCAGCGTCAA AGGCTGGGTG GAGAGCCGGA TCACGGCGCA ACCCGATCTG
ACGATTGACG AGTTGACCGC GGAACTGGCC GCGAAACACG GGGTGAAGGT TCATCGCTCG
TCGGTCGGTC GGCTGCTGCT CAGGCTCGGG CTGTCACACA AAAAAAGACC TGCAAGCCCT
TGA
 
Protein sequence
MGKAHPVELR ERAVRLVEQG NTHTEAARRL CVSIKFVNDM VRLKRETGSL APKPQGNPGR 
GKLTSVKGWV ESRITAQPDL TIDELTAELA AKHGVKVHRS SVGRLLLRLG LSHKKRPASP