Gene Dshi_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4013 
Symbol 
ID5714542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp80329 
End bp80982 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID641276925 
ProductRC187 
Protein accessionYP_001542221 
Protein GI159046551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.807507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTGGC TCTTCTACAC CGATTGCCGC GTCAAATCCT ACGCGGATGA GAAGGCGGAG 
ATTGCCCGGC TCTGCACCTT TGAGAGCGAC AGGCGCAAAA CCGAACTGGT CAAAGCCTGC
AAGGTCGGCT CGACCTGGTA TGCGGCGGCA AGGGTCACTA GCCTCGACGG CACCCCTGTC
GAGGGCACGA CCTATATCAC CGATCCTGAC GGCTCGATCA CCTTCGGCGC TGTCTTCCTC
ACCCGATACG ATGACGGCTG CTGGGGCTAC AAGGACATGG AAGAAAGCGC CGGCCCCGTC
GAGTCCCGCG CGCCGCTCAG CCTTCTGGCG CTTCTCTCCG ACCTGAAAGA CCCTGACAGC
TACGCCCATG CCTGGCGCCA GCGTTGCCGG GACTGGGCTG CGATCCCGGA CTACGAGGAA
GGCGACAAGA TCAGGCTCGC GGCCCCTGTG ACGCTCACCG ATGGCAGCAC CTGCCAGATC
GTCACGGCGA CCCACTACAG GCGGGGGCGG CAAAAACGCC GCTGCTACCG CATTGAGGAA
ACCGGCGTGC TCGTGCGGCT CTCTAGGGCC TCGCTTGCGG GCTCGGAGCT GCTCAGTTCC
GCGAAAGGTG CTGCCAGCCC GGTGCTGGCG GAGTTCCTGG CGAGGCGAAA TTAG
 
Protein sequence
MGWLFYTDCR VKSYADEKAE IARLCTFESD RRKTELVKAC KVGSTWYAAA RVTSLDGTPV 
EGTTYITDPD GSITFGAVFL TRYDDGCWGY KDMEESAGPV ESRAPLSLLA LLSDLKDPDS
YAHAWRQRCR DWAAIPDYEE GDKIRLAAPV TLTDGSTCQI VTATHYRRGR QKRRCYRIEE
TGVLVRLSRA SLAGSELLSS AKGAASPVLA EFLARRN