| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4011 |
|---|
| Symbol | |
|---|
| ID | 5714540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009957 |
|---|
| Strand | - |
|---|
| Start bp | 79361 |
|---|
| End bp | 79879 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641276923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542219 |
|---|
| Protein GI | 159046549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.498018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG ATAGCGTGCC CGCCCAAGCG CCCCTTGTCG TAAACGGATG GTCGATTTAT
GCGCATCCGC TCTTTCTGGA TCAGCTCGAA GGGCTGATTG AAGAGGTCGA GGCGCGTAAG
GCACGCGATC CTAAGACCTG GCGCAAGAAA AACCCGACGA AACGGCTGGC CGCCATCTTC
AAGCTGGTCA CCGAGGCCAT ACCGGTAGAT CCGGGTGCCG CCGCCTTTCG GCAAGGCGGC
ACACTCGGCG ATCACCGCAA GCACTGGTTC CGTGCGAAAT TCTTCCAGCA GTATCGGCTG
TTCTATCGGT TCAACAGCGA TGCGAAGGTC ATCGTGGTGG CCTGGGTGAA CGACGACAAG
ACCCTGCGCG CCTACGGCAG CAAGACGGAT GCCTATGCGA CGTTCAAAGG GATGTTGGAA
GATGGCAATC CACCTGACAA TTTTGACGCG CTCTTGAAAG AAGCAGCGGC GGCGAACAAG
CGGTTCGAGA CGTCCCTTGA AGCGGCGCCC GATCGGTAA
|
|---|
| Protein sequence | MSGDSVPAQA PLVVNGWSIY AHPLFLDQLE GLIEEVEARK ARDPKTWRKK NPTKRLAAIF
KLVTEAIPVD PGAAAFRQGG TLGDHRKHWF RAKFFQQYRL FYRFNSDAKV IVVAWVNDDK
TLRAYGSKTD AYATFKGMLE DGNPPDNFDA LLKEAAAANK RFETSLEAAP DR
|
|---|
| |