| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4007 |
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| Symbol | |
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| ID | 5714536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 71315 |
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| End bp | 73756 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641276919 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001542215 |
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| Protein GI | 159046545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4951] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.527137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGACA GAAGCGACAT TGAGGCGGAG TTGGCGCGGG TTCGAGCCCG TCTGGCCGAT
CTGGATGTCG AACGAGCGCA GCTTCAGCGT GAAGTTGCAG CGCTTGAGGC TCGCCTTGCT
GCAGAGCACG TGCCGGCAGT GAGACAACCC TCATTCGAGA ACGCCCCGGT TACGAATGCT
TCACCGTCGC ACCAAAAGGT CGAGCTGTTC CGCCGCCTGT TCGCCGGTCG GCCTGACGTG
TTCCCAGTGC GGTGGGAAAA CAGAAAAACT GACCGCTCGG GGTATTCGCC CTCCTGCGCC
AACGAGTGGG TGAAGGGGAT TTGTGGCAAG CCAAAGGTCA AATGCGGCCA GTGTCCCCAT
CAGAAGTTTA TCCCGCCGGA TGAAGGTGTC ATTGAGAGAC ACCTGCGCGG CGACGATGGT
CGGGGCGGGG ATTTTGTCGC CGGCGTCTAT CCGCTCCTGC TCGGTGACAC ATGCTGGTTC
CTGGCGGCGG ATTTTGACAA GGCATCCTGG GCGGAGGACG CCAACGCGCT GCTCGAAACC
TGCCGAGTGA AGGGAGTGCC CGCAGCGTTG GAACGGTCGA GGTCGGGCAA CGGGGGGCAT
GTCTGGATAT TCTTCTCCGA ACCGGTCTCG GCCCGTCTGG CGCGCCAGCT TGGATCGGTC
CTGATCACGG AAACGATGGA ACGGCGGCCA GAAATCGGCT TTGCTTCCTA TGACCGGTTG
TTTCCAAATC AGGATATCAT GCCGCTCGGC GGCTTCGGCA ACCTGATCGC ACTGCCGCTT
CAGAACACAG CGCGCAAAGC TGAAAACAGC GTCTTTGTCG ATGCTAGCCT GCGGCCATAT
GACGATCAGT GGGCCTATTT GTCTTCCTTG CCGCGATTGT CGGCGGCAGC AGTGACCCAG
CTCGTCGAAG CCGCCGAGCT TTCCGGGCGA GTGCTGGGTG TGCGCATGCC GGTAGAAGAT
GAGCAGGCGG ACGAACCGTG GAAAATGCCT CCGTCACGCC GCAGTACGCC GCGACGCCTC
GATGTACCTG TTCCGACAAC CATCAAGGTG ACGGTCGCAG ACCAAATCTA TATCGACCGT
TCGGACTTAC CTTCGGCCAT GATTGCGCAA TTGGTGCGGT TGGCGGCGTT CCAGAATCCC
GAATTCTATC GCGCGCAGGC CATGCGACTG CCAACATTCG GCAAGCCACG CATCGTGTCC
TGCGCCGAAC TGCATCCCCG ACACGTTGCC CTGCCCCGCG GTAGCTTCGA CGAAGCGATC
AGATTCCTGT CTGATCACGG TGCGACAGCC GATCTGGACG ATTTGCGTGT AGACGGAGCT
CGTTTGCCGG AGACGGTCTG CTTCGATGGC CAACTTCGCC AGCAGCAATC ACGAGCGTTT
GACGCATTGG CCGAACACGA TACCGGCGTG CTTGCCGCCA CGACTGCATT CGGCAAGACA
GTGGTAGCCT CGGCACTGAT TGCGCACCGC GCTCGCAATA CGCTGGTCTT GGTTCACCGC
CGGGAATTGC TGAACCAATG GGTCGAACGG CTTGGCTCAT TTTTGCAGAT CGATCCCAAG
CTGATAGGCA CCATCGGCGC CGGAAAACGC AAACTCACCG GTGTGATCGA TGTAGCGTTG
ATTCAGAGTC TGGTTCGGAA GGGCGAAGTT GACGATATCG TTGCCGATTA TGGCCATCTT
GTCGTCGATG AATGCCATCA CCTGTCCGCT GCGAGCTTTG AGCTTGTCGC CCGCAGATCG
AAAGCGCGCT ATGTCGCCGG GTTGTCGGCG ACGGTCGCTC GAAAGGACGG ACATCATCCG
ATCATCTTCA TGCAATGTGG CCCGGTGCGC CATCAGGTGA GCGCCAAATC GCAGGCAGCC
GAAAGCGGAC TGCGCCATCG AGCGCGGGAA CGTCACACGA GATTCCGGCT GCCAGAACCC
CTCGCCATGG CCGAGCGCCC GTCAATGCCC GCGATCTATG CCGCTCTGGC GGAGGACGAG
GCCCGAAACG ATCTGATCTT CGACGACGTG CTGAAATCAT TGGAGGCCAA ACGCTCACCG
ATCATACTAA CCGAGCGGAA GGATCACCTC GAGCACCTTC ATCAGCGGTT CTCCCGATTT
GCGAAGAACA TCGTCGTGCT CCGTGGCGGC ATGTCCGCAA AGGACCGGAA GGCCGCGCAT
GCGGCGCTGA ATGTGGATGA CGATGAGGAA CGGCTGATCC TCGCGACAGG GCGCTATATC
GGCGAAGGCT TCGATGACGC GCGGCTCGAC ACCCTGTTCC TGACGATGCC GATCGCATGG
AAGGGAACGC TGGCGCAATA TGTCGGCAGG TTGCACCGCC GACATGACGA CAAGAAGGAC
GTGTTGGTGG TCGACTATGT AGACAGTTCG GTCCCGGTCC TCGCCAGAAT GGCGGCCAAA
AGAAGAACCG GTTACCGGGC TCTCGGCTAT GTGATGGAAT AG
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| Protein sequence | MADRSDIEAE LARVRARLAD LDVERAQLQR EVAALEARLA AEHVPAVRQP SFENAPVTNA
SPSHQKVELF RRLFAGRPDV FPVRWENRKT DRSGYSPSCA NEWVKGICGK PKVKCGQCPH
QKFIPPDEGV IERHLRGDDG RGGDFVAGVY PLLLGDTCWF LAADFDKASW AEDANALLET
CRVKGVPAAL ERSRSGNGGH VWIFFSEPVS ARLARQLGSV LITETMERRP EIGFASYDRL
FPNQDIMPLG GFGNLIALPL QNTARKAENS VFVDASLRPY DDQWAYLSSL PRLSAAAVTQ
LVEAAELSGR VLGVRMPVED EQADEPWKMP PSRRSTPRRL DVPVPTTIKV TVADQIYIDR
SDLPSAMIAQ LVRLAAFQNP EFYRAQAMRL PTFGKPRIVS CAELHPRHVA LPRGSFDEAI
RFLSDHGATA DLDDLRVDGA RLPETVCFDG QLRQQQSRAF DALAEHDTGV LAATTAFGKT
VVASALIAHR ARNTLVLVHR RELLNQWVER LGSFLQIDPK LIGTIGAGKR KLTGVIDVAL
IQSLVRKGEV DDIVADYGHL VVDECHHLSA ASFELVARRS KARYVAGLSA TVARKDGHHP
IIFMQCGPVR HQVSAKSQAA ESGLRHRARE RHTRFRLPEP LAMAERPSMP AIYAALAEDE
ARNDLIFDDV LKSLEAKRSP IILTERKDHL EHLHQRFSRF AKNIVVLRGG MSAKDRKAAH
AALNVDDDEE RLILATGRYI GEGFDDARLD TLFLTMPIAW KGTLAQYVGR LHRRHDDKKD
VLVVDYVDSS VPVLARMAAK RRTGYRALGY VME
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