Gene Dshi_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4003 
Symbol 
ID5714532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp65932 
End bp67803 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content63% 
IMG OID641276915 
Producthypothetical protein 
Protein accessionYP_001542211 
Protein GI159046541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCC AAAGCGGAAA CCCAAAAATG AATCGTCATA ACAACAGCTT GAAACCCAAA 
ACTCCGCATA ACGGTGACGC GGCATATTAT GTTCTGGGCT ATCTCGAACA AGCCTTCCCA
ATCCATGCAC AAAAGCTCGT GGAGATCGAC GGTAACATGG TCGCGGAACC CTTGCGGGAT
GAGACCGGCG CGCTGGTCGT CTCGCGCGAG GCGCTCGCTC TGCGTGACGC GGCCATGATG
GAGTTGATGA CGCTGGCCCC GATCCCCTCG GCGCTCGACC AGATCCTCTG GGCCTTTGGC
GACGAGGCCG TCGCTGAAGT CACGGGCCGG TCCATCCGGC CCCTCAAGGC CGAGGATGGC
CACCTCTTCA TCGAGAAACG CGCCGCCAGC AGCAATTCGT CTGAGACCCA AGCCTTCATG
GACGGCGAGA AGGATATCCT GATCTTCTCC GACGCGGGCG GTACGGGCCG GTCCTATCAC
GCGGCGCAAA CGGCGAAGAA CCAGAAACGG CGGCGGCACT ATCTTCTGGA GCCCGGCTGG
CGCGCGGATG CGGCCATCCA GGGGCTGGGC CGCACGCATC GCTCTGCCCA GGTCAGCGCG
CCGTTCTTCC GTGTCTGCAC CTCCGATGTG CATGGCGAGA AACGCTTCAC GTCGACGATT
GCCAAACGCC TCGACCAGCT GGGGGCCTTG ACCAAGGGTC AGCGCGAGAC CGGCTCGCAG
GGCATGTTCC GCGAGGAGGA CAATCTCGAA AGCCCGATCG CACGGGCGGC GCTGCGTGGG
TATTTCGCCG ATCTTGCCGC CGGACGCGCT GAGGCGATGA GCTACGAGAG CTTCACCGAC
TGGACGGCCC TGCGGCTGAT CGACAAGGAC TGGGTGCTCC TTGAGGAGCT TCCCCCGATC
CAGCGGTTTC TGAACCGGGT TCTGGCCCTT CCCATCCACA TGCAGAACGC GCTCTTTGCC
GAGTTCATGC GCCGGATCGC TGATCAGTCT GAGCGCGCGC GCGCGGCCGG CACGCTCGAT
CTCGGCGTGG AAACTCTGCG TGGCGAAAAG ATCGAACAGG TATCCACAGA GGATCTCTGG
ACCTGCCCGA AATCCGGCGC CGTGACGCGG ATCATTGGAC TTGAAGTCAC CGACCCGGTC
CATGTGCTTT CGGCGGATGA CGCCCTGTCG CGCAATTTCG ATAAGCTGCC GATGGTCAAC
CGCGCGTCGG GTCGCGCGGC GCTCATCTCG GCGCGGCCAA TGCAGATGTA TGACGAGGAC
ACTGTCACGC TGATGCGCAA GGCGGTGCGG CCAAACGGGT CGAGCTATCT CGAAGAGGCA
CGGTTTGAGT CCTCGGCTTG GGAAGAGATC GGCAAGCCTG AGTTTGCAAG GCTTTGGGAT
GAAGAGGCCG CGTCCCTGCC GAAAACCACC ACGACCAAGC TCTACCTGCT GACCGGGCTG
CTGTTGCCGA TCTGGAAGGA CATTCCGACC ACGAATGAAC GCATCTACAG GGTCACGCCT
GACGGGGCGA CGGCCATGAT CGGGCGCACG TTGAGCGAAG AAGGGGCGGC CGCGCTCCGC
GCCCGCTTCC TTGTCTCCAA CCCGCAAACG CCACAGGAGA TGTTGACCGC CGCCCTCGGC
ACCACCGCAC CTGTTGATCT GGGCCGGGGT CTGACCCTGA CCCGTCGCCG GGTCGCAGGC
GAGATGCGCC TTGAGTTGTG CGGCGTTGAC AGGGGCATGA TTGATGGCCT CAAGGCCCTC
GGCTGCTTCA CCGAGATCAT CGCCTTCCAG CTACGGGTGT TCCTGCCGCA TGGGGACGGG
ATCGACACGG GAAGCATTCT GGCCCGGATC GTGGGGCAGG AAGTCGCCAT GACGTCAGAA
CAAGCCGCCT GA
 
Protein sequence
MIIQSGNPKM NRHNNSLKPK TPHNGDAAYY VLGYLEQAFP IHAQKLVEID GNMVAEPLRD 
ETGALVVSRE ALALRDAAMM ELMTLAPIPS ALDQILWAFG DEAVAEVTGR SIRPLKAEDG
HLFIEKRAAS SNSSETQAFM DGEKDILIFS DAGGTGRSYH AAQTAKNQKR RRHYLLEPGW
RADAAIQGLG RTHRSAQVSA PFFRVCTSDV HGEKRFTSTI AKRLDQLGAL TKGQRETGSQ
GMFREEDNLE SPIARAALRG YFADLAAGRA EAMSYESFTD WTALRLIDKD WVLLEELPPI
QRFLNRVLAL PIHMQNALFA EFMRRIADQS ERARAAGTLD LGVETLRGEK IEQVSTEDLW
TCPKSGAVTR IIGLEVTDPV HVLSADDALS RNFDKLPMVN RASGRAALIS ARPMQMYDED
TVTLMRKAVR PNGSSYLEEA RFESSAWEEI GKPEFARLWD EEAASLPKTT TTKLYLLTGL
LLPIWKDIPT TNERIYRVTP DGATAMIGRT LSEEGAAALR ARFLVSNPQT PQEMLTAALG
TTAPVDLGRG LTLTRRRVAG EMRLELCGVD RGMIDGLKAL GCFTEIIAFQ LRVFLPHGDG
IDTGSILARI VGQEVAMTSE QAA