Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4003 |
Symbol | |
ID | 5714532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | - |
Start bp | 65932 |
End bp | 67803 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641276915 |
Product | hypothetical protein |
Protein accession | YP_001542211 |
Protein GI | 159046541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCC AAAGCGGAAA CCCAAAAATG AATCGTCATA ACAACAGCTT GAAACCCAAA ACTCCGCATA ACGGTGACGC GGCATATTAT GTTCTGGGCT ATCTCGAACA AGCCTTCCCA ATCCATGCAC AAAAGCTCGT GGAGATCGAC GGTAACATGG TCGCGGAACC CTTGCGGGAT GAGACCGGCG CGCTGGTCGT CTCGCGCGAG GCGCTCGCTC TGCGTGACGC GGCCATGATG GAGTTGATGA CGCTGGCCCC GATCCCCTCG GCGCTCGACC AGATCCTCTG GGCCTTTGGC GACGAGGCCG TCGCTGAAGT CACGGGCCGG TCCATCCGGC CCCTCAAGGC CGAGGATGGC CACCTCTTCA TCGAGAAACG CGCCGCCAGC AGCAATTCGT CTGAGACCCA AGCCTTCATG GACGGCGAGA AGGATATCCT GATCTTCTCC GACGCGGGCG GTACGGGCCG GTCCTATCAC GCGGCGCAAA CGGCGAAGAA CCAGAAACGG CGGCGGCACT ATCTTCTGGA GCCCGGCTGG CGCGCGGATG CGGCCATCCA GGGGCTGGGC CGCACGCATC GCTCTGCCCA GGTCAGCGCG CCGTTCTTCC GTGTCTGCAC CTCCGATGTG CATGGCGAGA AACGCTTCAC GTCGACGATT GCCAAACGCC TCGACCAGCT GGGGGCCTTG ACCAAGGGTC AGCGCGAGAC CGGCTCGCAG GGCATGTTCC GCGAGGAGGA CAATCTCGAA AGCCCGATCG CACGGGCGGC GCTGCGTGGG TATTTCGCCG ATCTTGCCGC CGGACGCGCT GAGGCGATGA GCTACGAGAG CTTCACCGAC TGGACGGCCC TGCGGCTGAT CGACAAGGAC TGGGTGCTCC TTGAGGAGCT TCCCCCGATC CAGCGGTTTC TGAACCGGGT TCTGGCCCTT CCCATCCACA TGCAGAACGC GCTCTTTGCC GAGTTCATGC GCCGGATCGC TGATCAGTCT GAGCGCGCGC GCGCGGCCGG CACGCTCGAT CTCGGCGTGG AAACTCTGCG TGGCGAAAAG ATCGAACAGG TATCCACAGA GGATCTCTGG ACCTGCCCGA AATCCGGCGC CGTGACGCGG ATCATTGGAC TTGAAGTCAC CGACCCGGTC CATGTGCTTT CGGCGGATGA CGCCCTGTCG CGCAATTTCG ATAAGCTGCC GATGGTCAAC CGCGCGTCGG GTCGCGCGGC GCTCATCTCG GCGCGGCCAA TGCAGATGTA TGACGAGGAC ACTGTCACGC TGATGCGCAA GGCGGTGCGG CCAAACGGGT CGAGCTATCT CGAAGAGGCA CGGTTTGAGT CCTCGGCTTG GGAAGAGATC GGCAAGCCTG AGTTTGCAAG GCTTTGGGAT GAAGAGGCCG CGTCCCTGCC GAAAACCACC ACGACCAAGC TCTACCTGCT GACCGGGCTG CTGTTGCCGA TCTGGAAGGA CATTCCGACC ACGAATGAAC GCATCTACAG GGTCACGCCT GACGGGGCGA CGGCCATGAT CGGGCGCACG TTGAGCGAAG AAGGGGCGGC CGCGCTCCGC GCCCGCTTCC TTGTCTCCAA CCCGCAAACG CCACAGGAGA TGTTGACCGC CGCCCTCGGC ACCACCGCAC CTGTTGATCT GGGCCGGGGT CTGACCCTGA CCCGTCGCCG GGTCGCAGGC GAGATGCGCC TTGAGTTGTG CGGCGTTGAC AGGGGCATGA TTGATGGCCT CAAGGCCCTC GGCTGCTTCA CCGAGATCAT CGCCTTCCAG CTACGGGTGT TCCTGCCGCA TGGGGACGGG ATCGACACGG GAAGCATTCT GGCCCGGATC GTGGGGCAGG AAGTCGCCAT GACGTCAGAA CAAGCCGCCT GA
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Protein sequence | MIIQSGNPKM NRHNNSLKPK TPHNGDAAYY VLGYLEQAFP IHAQKLVEID GNMVAEPLRD ETGALVVSRE ALALRDAAMM ELMTLAPIPS ALDQILWAFG DEAVAEVTGR SIRPLKAEDG HLFIEKRAAS SNSSETQAFM DGEKDILIFS DAGGTGRSYH AAQTAKNQKR RRHYLLEPGW RADAAIQGLG RTHRSAQVSA PFFRVCTSDV HGEKRFTSTI AKRLDQLGAL TKGQRETGSQ GMFREEDNLE SPIARAALRG YFADLAAGRA EAMSYESFTD WTALRLIDKD WVLLEELPPI QRFLNRVLAL PIHMQNALFA EFMRRIADQS ERARAAGTLD LGVETLRGEK IEQVSTEDLW TCPKSGAVTR IIGLEVTDPV HVLSADDALS RNFDKLPMVN RASGRAALIS ARPMQMYDED TVTLMRKAVR PNGSSYLEEA RFESSAWEEI GKPEFARLWD EEAASLPKTT TTKLYLLTGL LLPIWKDIPT TNERIYRVTP DGATAMIGRT LSEEGAAALR ARFLVSNPQT PQEMLTAALG TTAPVDLGRG LTLTRRRVAG EMRLELCGVD RGMIDGLKAL GCFTEIIAFQ LRVFLPHGDG IDTGSILARI VGQEVAMTSE QAA
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