Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3999 |
Symbol | |
ID | 5714528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | - |
Start bp | 63705 |
End bp | 64433 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641276911 |
Product | ParB-like nuclease |
Protein accession | YP_001542207 |
Protein GI | 159046537 |
COG category | [S] Function unknown |
COG ID | [COG5489] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.524272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGCAG GAACCCTTAC CCGCAATGTC GAGACCGCAG CCGCCGAATA CACCGGCATG ATCCATTCGA CGCGCTTTGA CATCGCCATC CAGCTCGAGG CACGGGCCAA GATGTCCGAA CGCAGCCCGG ATTACGACGT GACGGCGGTC AACAAGTCTG GCCGCAAGGT GCGCATCGGT ACGGCCTGGA ACGAGACCGG CACGACCAGC GGCAATCCCT ACATCTCGAT GCAGATCGAT GTCGGTTTGG GCCCGTTCCG CGTCAATGCC GTGCAGACGA AGGAAGCGCG CACAGCCCAG AGCGGCGAAT TCGAGATCAT CCCGCTGGTC TCGAACGGCC TGATGAAATC CGGCTCGATC TCGGGCGAGC TCACCGCCAT GGACGCCGAC AACGCCTTCA CCGGCTACAT CGCCAACATG ATGTTCGATC TGGAGTTCAT GCTGATCGAG AACAGCTACA AGACCGAGGA GACCCACCCC GATTACCGCA TCGAAGTCAG CTCGCCCCGG GGCACGCCGA TCCGCGTCGG CTCGGCCTGG ATGGCCAAGA GCAGCCGCAC GGGCAATGAC TACCTGTCGC TGCTGATCAA CACGCCTGAT GGCGACCTGC GTGTCAACGC CGTCCAGAAC GAAGAACAGC GCGGTGGCCA GACTTTCTCG ATCATTCCGT TCATCGACAG CGGTGATCAA GCGCACGATG CGGGCGCGGG GCTGTCGCTG GTCGCGTGA
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Protein sequence | MFAGTLTRNV ETAAAEYTGM IHSTRFDIAI QLEARAKMSE RSPDYDVTAV NKSGRKVRIG TAWNETGTTS GNPYISMQID VGLGPFRVNA VQTKEARTAQ SGEFEIIPLV SNGLMKSGSI SGELTAMDAD NAFTGYIANM MFDLEFMLIE NSYKTEETHP DYRIEVSSPR GTPIRVGSAW MAKSSRTGND YLSLLINTPD GDLRVNAVQN EEQRGGQTFS IIPFIDSGDQ AHDAGAGLSL VA
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