Gene Dshi_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3999 
Symbol 
ID5714528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp63705 
End bp64433 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID641276911 
ProductParB-like nuclease 
Protein accessionYP_001542207 
Protein GI159046537 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.524272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCAG GAACCCTTAC CCGCAATGTC GAGACCGCAG CCGCCGAATA CACCGGCATG 
ATCCATTCGA CGCGCTTTGA CATCGCCATC CAGCTCGAGG CACGGGCCAA GATGTCCGAA
CGCAGCCCGG ATTACGACGT GACGGCGGTC AACAAGTCTG GCCGCAAGGT GCGCATCGGT
ACGGCCTGGA ACGAGACCGG CACGACCAGC GGCAATCCCT ACATCTCGAT GCAGATCGAT
GTCGGTTTGG GCCCGTTCCG CGTCAATGCC GTGCAGACGA AGGAAGCGCG CACAGCCCAG
AGCGGCGAAT TCGAGATCAT CCCGCTGGTC TCGAACGGCC TGATGAAATC CGGCTCGATC
TCGGGCGAGC TCACCGCCAT GGACGCCGAC AACGCCTTCA CCGGCTACAT CGCCAACATG
ATGTTCGATC TGGAGTTCAT GCTGATCGAG AACAGCTACA AGACCGAGGA GACCCACCCC
GATTACCGCA TCGAAGTCAG CTCGCCCCGG GGCACGCCGA TCCGCGTCGG CTCGGCCTGG
ATGGCCAAGA GCAGCCGCAC GGGCAATGAC TACCTGTCGC TGCTGATCAA CACGCCTGAT
GGCGACCTGC GTGTCAACGC CGTCCAGAAC GAAGAACAGC GCGGTGGCCA GACTTTCTCG
ATCATTCCGT TCATCGACAG CGGTGATCAA GCGCACGATG CGGGCGCGGG GCTGTCGCTG
GTCGCGTGA
 
Protein sequence
MFAGTLTRNV ETAAAEYTGM IHSTRFDIAI QLEARAKMSE RSPDYDVTAV NKSGRKVRIG 
TAWNETGTTS GNPYISMQID VGLGPFRVNA VQTKEARTAQ SGEFEIIPLV SNGLMKSGSI
SGELTAMDAD NAFTGYIANM MFDLEFMLIE NSYKTEETHP DYRIEVSSPR GTPIRVGSAW
MAKSSRTGND YLSLLINTPD GDLRVNAVQN EEQRGGQTFS IIPFIDSGDQ AHDAGAGLSL
VA