Gene Dshi_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3996 
Symbol 
ID5714525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp58264 
End bp58851 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID641276908 
Producthypothetical protein 
Protein accessionYP_001542204 
Protein GI159046534 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTG ATCCGGCTCC GAGCGAACTC TTTGCCCTGG CCCGGCACCG GGTCCATGAG 
GCCGAAGGTC CAGGCCGGCG CAGCTTCGCA TTGCTGCAGG CCGCCCGACA TACCGAGGCC 
CTGATCTGGA TCATTCCCGG GCATGCCCCG CACCAGCCAA TGCTCCGGGG TCTGCCCGAA 
GGCGTCGGGG AGCGGCTGCA TCTCATCCGT CCCGCGAATG AGACCGACCT GCTCTGGGCC 
ACCGAGGAAG CGCTACGATC CGAAGGGGTC GGACTGGTGA TCGCGGAGCC GGAAAAGCCC 
CTCTCCCTGA TCGCCGGGCG ACGCCTGCAG CTGGCCGCGG AAGCCGGTCG AACCACCGGA 
CTCATGCTGA TCCGCGAAGG CCAGGGCAGC AATGCAGCCG AAACGCGGTG GCATTGCGCA 
CCGAATGCGT CGGAACGACG GGACTCGACT CTGCATCAAT GGGCCCTTAG TAAGAACAAA 
AAGGGAACAT TGAGAACCTG GACTGTGCAT TGGAATGGCA AGACGGCTGC TGTCCATCCG 
GTTTCCGCGG CTGGCAAGCG ACACGAGTCT GCGGAGACGT CCCGTTGA
 
Protein sequence
MRFDPAPSEL FALARHRVHE AEGPGRRSFA LLQAARHTEA LIWIIPGHAP HQPMLRGLPE 
GVGERLHLIR PANETDLLWA TEEALRSEGV GLVIAEPEKP LSLIAGRRLQ LAAEAGRTTG 
LMLIREGQGS NAAETRWHCA PNASERRDST LHQWALSKNK KGTLRTWTVH WNGKTAAVHP 
VSAAGKRHES AETSR