Gene Dshi_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3995 
Symbol 
ID5714524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp57594 
End bp58274 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID641276907 
Producthypothetical protein 
Protein accessionYP_001542203 
Protein GI159046533 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAATC TCTACTCCCA GACCAAAAGC CAGGACGCGA TGCGCCACCT GTTTAACGAC 
ATGCTCGGGG AGAATGAGGA ACTTGTAGAC AGCACCGGGA ACCTGCCGCC TCAACCTGGT 
ATCTGGCCCG ATTATCCGGC ACCGATCATT CGACATGGTG AAAGCGCAGC GTGGCAGCTG 
GCCATGGCCC GTTGGGGCAT GCCGACCCCT GCGAAGTTTC TCGAAGGCAA GCGCACCGAC 
AAGGGTGTCA CCAATATCCG CAATGTCGGC TCTCCCCATT GGCGGCGCTG GCTCGGTGTC 
GAACATCGTT GCCTCGTGCC CTTCACCAGT TTTTCGGAAA TCGACGGGCG CCGGGGTGCG 
CCGCGCAATT CGCCGGTCTG GTTCGCTTTG GACGAGGATC GGCCGCTCGC CTTCTTCGCC 
GGGCTGCGGA CGGAATGGAC CTCGGTGCGC AAGCTGAAGG AAGGCGAGGT GACAGCGGAG 
ATCTTCGGTT TCCTGACCTG CCCGCCCAAT GCCGAAGTTG CGCCGATCCA CCCCAAAGCC 
ATGCCCGTCA TCCTCACGCA GCCCGAGGAA TGGCGGCACT GGCTGACCGC GCCGGCCGAG 
GAGGCCCTGA AGCTCCAGCG TCCCCTCCCG GACGGGAGGC TGAAGATCGT TGCCGAGGGG 
GTGCGCGAGG ATGCGGTTTG A
 
Protein sequence
MCNLYSQTKS QDAMRHLFND MLGENEELVD STGNLPPQPG IWPDYPAPII RHGESAAWQL 
AMARWGMPTP AKFLEGKRTD KGVTNIRNVG SPHWRRWLGV EHRCLVPFTS FSEIDGRRGA 
PRNSPVWFAL DEDRPLAFFA GLRTEWTSVR KLKEGEVTAE IFGFLTCPPN AEVAPIHPKA 
MPVILTQPEE WRHWLTAPAE EALKLQRPLP DGRLKIVAEG VREDAV