| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3993 |
|---|
| Symbol | |
|---|
| ID | 5714522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009957 |
|---|
| Strand | - |
|---|
| Start bp | 54824 |
|---|
| End bp | 55849 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641276905 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542201 |
|---|
| Protein GI | 159046531 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGCA TGACCCCACT CAGCAGCATC GCGATGAGCG CCTATACCGA CCTGGTGCGT
CTTCTGAAGG ACGACGCCTT GTCCGGTGTC GAAGGCAAGC CCACGCTCAA GGAGCGTGGG
GATAAGGCCT ATTGGTATGC CGCGCGCCGT GTCGGGACGG AGATGCGGTT CATCTATATC
GGCGAAGACA GCGACGAGAC GCGCGCGCGC ATCGACCGGA TCGAAGAGCT GCGCGCAACG
GCCAAGGATC GGCAGGCGGA ACGGTCGCGG CTTGTCCGGC TCTTGCGTGC GGAAGGAATG
ACGCCCATCG ACCGGGCGAC CGGTTCCATC CTGTCGGCCA TGGCCGCAGC CGGAACCTTC
CGGTTGGGTG GCACCATCGT CGGAACCAAT GCATTTCGCC TCTATGAAGG CGAGCTTGGT
ATCCGTCTGC CAATTGGCGG TATGGCCAAT ACTGGCGACA TCGACATCGC GCAGTTCGAG
AAGCTCAGCG TTGCGTTGCA GGATCAGGTC GACCCGGGTC TTGCCGAGAC GTTCTCAGCG
CTCAAATTCG ATCCTCTGCC AGCTCTTGAC CAAGGTCGGA CATGGCGATG GGCCCAGGGT
GGCAGCGGCC AACTGGTCGA GTTCCTGACA CCGGCGTTCG GGGATGAGAC CATCCGTGAT
CTGCCAGCAT TGGGCGTGAA CGCCCAAGGA TTGAACTATC TCAACTTCCT GATCGCTGAG
CCGATCCACG CGGCGGCGAT CTATAGATCC GGCGTTCTGG TGCAGGTGCC CCGCCCGGAG
CGTTATGCAG TCCACAAACT GATCATTGCC GACCGGCGCC GCGATGGGGC AGGGAGCCTG
AAATCCGCGA AGGACCGCGA GCAGGCGGCT TTCCTTATCG AAGCGATGGC CGAGGACCGG
CCCGATGATC TGGCTCGGGC CTATGCCACC GCAATGGAGG TTGGGCCGCG CTGGCGGGAA
CACATCGGCA ACTCGCTGAA GCGAATGCCT GATACCAGGG GGATGCTCGA CAGCTTGGGC
GCGTGA
|
|---|
| Protein sequence | MIGMTPLSSI AMSAYTDLVR LLKDDALSGV EGKPTLKERG DKAYWYAARR VGTEMRFIYI
GEDSDETRAR IDRIEELRAT AKDRQAERSR LVRLLRAEGM TPIDRATGSI LSAMAAAGTF
RLGGTIVGTN AFRLYEGELG IRLPIGGMAN TGDIDIAQFE KLSVALQDQV DPGLAETFSA
LKFDPLPALD QGRTWRWAQG GSGQLVEFLT PAFGDETIRD LPALGVNAQG LNYLNFLIAE
PIHAAAIYRS GVLVQVPRPE RYAVHKLIIA DRRRDGAGSL KSAKDREQAA FLIEAMAEDR
PDDLARAYAT AMEVGPRWRE HIGNSLKRMP DTRGMLDSLG A
|
|---|
| |