Gene Dshi_3990 details

Gene Information

• Locus tag: Dshi_3990
• ID: 5714519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009957
• Strand: -
• Start bp: 52923
• End bp: 53516
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641276903
• Product: hypothetical protein
• Protein accession: YP_001542199
• Protein GI: 159046529

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.153025
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGAA CAAAACGCCT GACAGAGATC GAGAAGATGC AGATCGTCCG CGAGGCCGCG 
GAGGGTGTGT CGACGTCTGA GCTGGCTGAG CGTTTCGAGG TCACATCGCG GGCCGTGCGC 
TACGTTCTGA AAGCCGATGC CGAGCGCCAG ACGGATGCCG CAATTCCGGT CTCCGCTGTC 
AGTGTGAAGG TGACGACCGC GGAGCTGGCA GCCCTCGACG CGGTGCTGGC CGCGGCCGGG 
ATCGAGAGCC GGGCCGAGGG TCTGCGGCGG CTCATTCAGG CGGCAGGCGG GGTGTTCGTT 
CCGGACGCGC AGATGGCGGC CGAAATGGCG CGTTACCGCG CCTCTCTGCA CGAGGTCGGC 
AATGGGGTCG CGCAGATCGC CAAGCAGATG ACGCGGGCCA ACCAGATGGG GCAGGGGGCT 
AATGGTGGCA CGCGTGCGGA GTTCTCCGAA TTGCGCCTCG CGCAGATGCG CGGACTGGCG 
CGGTTCATCC TCGACTCCGC TGACGAGATC GATCTGCTCC TGCGCCGCCG TCGCGACGCG 
ATGCAGCTCG AGGCCACGGC CGCGCTGAGG GAGTTTGCGC ATGCGGCTGA ATGA 

 

Protein sequence

MSRTKRLTEI EKMQIVREAA EGVSTSELAE RFEVTSRAVR YVLKADAERQ TDAAIPVSAV 
SVKVTTAELA ALDAVLAAAG IESRAEGLRR LIQAAGGVFV PDAQMAAEMA RYRASLHEVG 
NGVAQIAKQM TRANQMGQGA NGGTRAEFSE LRLAQMRGLA RFILDSADEI DLLLRRRRDA 
MQLEATAALR EFAHAAE