| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3987 |
|---|
| Symbol | |
|---|
| ID | 5714516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009957 |
|---|
| Strand | - |
|---|
| Start bp | 47163 |
|---|
| End bp | 48227 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641276900 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542196 |
|---|
| Protein GI | 159046526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAG ATCACCCTGA CGTCCGTGTG TGCACGTTCG GTTATCCGGC CAGCAAATTT
AAGAAATGGA TCAAAAAAGA ACTCGATATC TTCGAGCTCG CCAAACTGGC AACAGAAATT
CTATGTGGAA AAGGCGTTTG CAAACGCCCC ATAATCTTTG TCACGCACAG CCTTGGTGGG
ATCATAACAA AACTGTTATT GAACCACTGC CATGGCTCAA GCGACGAGCA AGCCGCCGCA
CTTGCCGCTC GGACGTTGCG CGTAATGTTT TTGGCAACAC CGCATTCAGC TCCCCCGTTA
CCGCAAGTCG TGAAGAAAGA ACTCCCTGGC TGGTCTTCGT CTCATATCAC TGCGTTGTCA
GGTGAGACCA CTGTGCTTGA GTATATCCGA GACACCTACG GTAAATATGT GGCAAGCAAT
GAAAACCTAA AGAACGTTGC ATATTACGAG TCACAGAGAC TTTCTGGTGT CGTTCAAGTA
GTTCCCATGA ACTGCGCCAA TCCCGGGATC AGCGGCACCG ATCCAATTCC CATTGAGGCT
GACCACATCA ACATTTGCAA GCCTCAATCC AAGGAAAGCG CCATTTATAC CAGTGTGAAT
AGACACATCG AACAAGCCAA GAAGTTAGCA GCGGACACAC CGGAACTTAG CGATCACGAT
ACCCAGATCG CTGCGGAAGG GTATTCTGAA AAGGCAGACT ATGACCGCAG AGATTTGTGG
GAAAAAATGA ACGCTGCGGA CCGCGAAAAC AGATACACCT ATGCGAACAG CCGTCAGAAC
AGTTTTGCAC GTAAGTATAT GAGTCTTGGT TTGCAGCCAG GCACGCGTTC TGACTACGAT
CTCCTTTTGA GTGAAGTTGA GCAGCGCTTT CAGGCGCAAG TTTACTTCCC GTTGGTCTGC
AAAGGGGCGA CAGAAGAAGA AATCGACAAT GCGGTTCAGG AAAAAGTCAT CGAACCTCTC
GCCAACAAAA AGATCGGAGC TACGACTTTT GGTGCTACCA ACATCCAAAG CGCCATCTAT
TTCCTCACAG AGCAGTGCCA CATACGTTGG GATACTGAAC GATGA
|
|---|
| Protein sequence | MAEDHPDVRV CTFGYPASKF KKWIKKELDI FELAKLATEI LCGKGVCKRP IIFVTHSLGG
IITKLLLNHC HGSSDEQAAA LAARTLRVMF LATPHSAPPL PQVVKKELPG WSSSHITALS
GETTVLEYIR DTYGKYVASN ENLKNVAYYE SQRLSGVVQV VPMNCANPGI SGTDPIPIEA
DHINICKPQS KESAIYTSVN RHIEQAKKLA ADTPELSDHD TQIAAEGYSE KADYDRRDLW
EKMNAADREN RYTYANSRQN SFARKYMSLG LQPGTRSDYD LLLSEVEQRF QAQVYFPLVC
KGATEEEIDN AVQEKVIEPL ANKKIGATTF GATNIQSAIY FLTEQCHIRW DTER
|
|---|
| |