Gene Dshi_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3979 
Symbol 
ID5714508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp38371 
End bp39180 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content61% 
IMG OID641276892 
Producthypothetical protein 
Protein accessionYP_001542188 
Protein GI159046518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.869571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATT TGCTCGTGAG GACGGCATTG GCCACGACGC TTGGGATCGG TCTGCATCTC 
GGCACCCTGT CCGCTGCCGT GGCGCAAGGT GTGCCGGTCG TCGACACCCA GAATATCGCG
CAAAACATCC AGCAGCTCCG GCAGATGATC GAAGACGAGA TTCTGCAAAA CGAGCAGCTG
ACGCAGCTCC GTGAACAGCT TGCCACACTC ACGGATCAAC TCGCGGAGCT GCAAAGAACT
TATGAAGCAC TCACCCGCCT TGCCGAGCTT CCCGAGATCA TCCGCACGGA AATGGAAGAC
GAGTTGAACG GCCTGCTCGA CCAAGAGTTC GGGGACATCC TCGCCACTAT TGAGGCGATC
AAGACTGGGG ATTTCTCGGG CCTGTCCGGT TCTGGCGCAG GCGAAATCGA AACCCAGATG
GACCGGGTGC TGGCCGATCT CGGCTTCGAT GAAGACACCC TCTCGGAAAT GGCCACCAGC
GGCAATCCCG GGGCCAACCG CGTGGCGACG CAGGCCACGA CCGGTGCGCT CGTCTCGGCG
GCGGCCCAGA ACAGCTATGA GGATGCCGGC CAATCGCTCG AGCGGGTAGA CCGCCTTGTC
GGGCTCATCG ACGACATGGA AGAGCTCAAG CAAAGCGTCG ATCTCAACAC GCGCGTGACA
GCTGAATTGG CCATCGCCCT CGTGGCGATG TGGCAGCTGG AAGCGATTCA AACCGTGGGC
GATGGCACGG GCGGCGTGAT CGATGCCGCC ACCATCGCCG AAGAGCAGCG CTTCATGGAT
TTCACCTTGC CGGACCTCCG GGCCGAGTGA
 
Protein sequence
MRDLLVRTAL ATTLGIGLHL GTLSAAVAQG VPVVDTQNIA QNIQQLRQMI EDEILQNEQL 
TQLREQLATL TDQLAELQRT YEALTRLAEL PEIIRTEMED ELNGLLDQEF GDILATIEAI
KTGDFSGLSG SGAGEIETQM DRVLADLGFD EDTLSEMATS GNPGANRVAT QATTGALVSA
AAQNSYEDAG QSLERVDRLV GLIDDMEELK QSVDLNTRVT AELAIALVAM WQLEAIQTVG
DGTGGVIDAA TIAEEQRFMD FTLPDLRAE