Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3979 |
Symbol | |
ID | 5714508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | + |
Start bp | 38371 |
End bp | 39180 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641276892 |
Product | hypothetical protein |
Protein accession | YP_001542188 |
Protein GI | 159046518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.869571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATT TGCTCGTGAG GACGGCATTG GCCACGACGC TTGGGATCGG TCTGCATCTC GGCACCCTGT CCGCTGCCGT GGCGCAAGGT GTGCCGGTCG TCGACACCCA GAATATCGCG CAAAACATCC AGCAGCTCCG GCAGATGATC GAAGACGAGA TTCTGCAAAA CGAGCAGCTG ACGCAGCTCC GTGAACAGCT TGCCACACTC ACGGATCAAC TCGCGGAGCT GCAAAGAACT TATGAAGCAC TCACCCGCCT TGCCGAGCTT CCCGAGATCA TCCGCACGGA AATGGAAGAC GAGTTGAACG GCCTGCTCGA CCAAGAGTTC GGGGACATCC TCGCCACTAT TGAGGCGATC AAGACTGGGG ATTTCTCGGG CCTGTCCGGT TCTGGCGCAG GCGAAATCGA AACCCAGATG GACCGGGTGC TGGCCGATCT CGGCTTCGAT GAAGACACCC TCTCGGAAAT GGCCACCAGC GGCAATCCCG GGGCCAACCG CGTGGCGACG CAGGCCACGA CCGGTGCGCT CGTCTCGGCG GCGGCCCAGA ACAGCTATGA GGATGCCGGC CAATCGCTCG AGCGGGTAGA CCGCCTTGTC GGGCTCATCG ACGACATGGA AGAGCTCAAG CAAAGCGTCG ATCTCAACAC GCGCGTGACA GCTGAATTGG CCATCGCCCT CGTGGCGATG TGGCAGCTGG AAGCGATTCA AACCGTGGGC GATGGCACGG GCGGCGTGAT CGATGCCGCC ACCATCGCCG AAGAGCAGCG CTTCATGGAT TTCACCTTGC CGGACCTCCG GGCCGAGTGA
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Protein sequence | MRDLLVRTAL ATTLGIGLHL GTLSAAVAQG VPVVDTQNIA QNIQQLRQMI EDEILQNEQL TQLREQLATL TDQLAELQRT YEALTRLAEL PEIIRTEMED ELNGLLDQEF GDILATIEAI KTGDFSGLSG SGAGEIETQM DRVLADLGFD EDTLSEMATS GNPGANRVAT QATTGALVSA AAQNSYEDAG QSLERVDRLV GLIDDMEELK QSVDLNTRVT AELAIALVAM WQLEAIQTVG DGTGGVIDAA TIAEEQRFMD FTLPDLRAE
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