Gene Dshi_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3958 
Symbol 
ID5714487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand- 
Start bp24317 
End bp24976 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID641276871 
ProductDSBA oxidoreductase 
Protein accessionYP_001542167 
Protein GI159046497 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.176467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC GCGGCCTCAT CCTGTCCGTT CTCGCGCTCG GGGTCGCCGG TTTCGGCGGT 
GCCGCCTGGT ATGCCACCCG CCCCGACCCG ATTGCCGCGT CCGATCCCAT CGACCCTGAA 
ATGGCCGACG CGCTGATCCG ACCCTATTCC CCGATCCTCG GGCCCGAGGA TGCGCCCGTA 
ACCATCGTTG AATTCTTCGA CCCGGCCTGC GAGGCATGCC GCGCTTTCTA TCCGGTCGTC 
GAGGATATCA TGGCGGAGCA CGGAGACGCG GTGCGCGTTG TAATCCGCTA TACGCCTTTT 
CACGGCGAGG CGTCGGTAGA AGCGATCCGT GTGCTCGAGG CGGCGCGCAT GCAGGACGTG 
TTTGAACCTG TGCTCGAGGC AGTCTTGCGA GAGCAGCCCA GATGGGCGTC TCACGGGACC 
CCGGCACCCG GATTGATCCT TGAGATTGCA GCAAGCGGAG GTCTGGATGT CGAAGCTGCC 
CGGACACAGA TGCTGGCCCC CGGTGTTGTG GCGGTGCTCA ACCAGGACCG CGCCGATGTC 
GAGACAGTCG GGGTCCGCCA AACGCCCACG TTCTTCGTGA ACGGCAAGCC TCTCGATCCG 
TTCGGTGAGG CCGAATTGCA GAGGCTGGTG GCAGTGGAAG TTGCGGCAAG CCAAAGCTGA
 
Protein sequence
MKRRGLILSV LALGVAGFGG AAWYATRPDP IAASDPIDPE MADALIRPYS PILGPEDAPV 
TIVEFFDPAC EACRAFYPVV EDIMAEHGDA VRVVIRYTPF HGEASVEAIR VLEAARMQDV 
FEPVLEAVLR EQPRWASHGT PAPGLILEIA ASGGLDVEAA RTQMLAPGVV AVLNQDRADV 
ETVGVRQTPT FFVNGKPLDP FGEAELQRLV AVEVAASQS