| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3955 |
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| Symbol | |
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| ID | 5714484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 21828 |
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| End bp | 23201 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641276868 |
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| Product | peptidase M23B |
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| Protein accession | YP_001542164 |
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| Protein GI | 159046494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.053083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAA GAACTGTCTT GGCGGCCGTT GCGGTCGCAG GCGCATTTTC GGTGACCGCC
ATCGCCATCT CTGGCGTTCT GTCCAAAGAA CCGGTGCCCC CTGCGATTGC TGAAGCGACC
CTCTGGACTC CCAATCCGCT TGCGCCGCCT CGGATTACCG AAACCAATTC GGTCCGCCCT
ACACTCGCCC AGGCGGATAT CGCATTCGAG TTCAGACCCC GGCCGCTCCT GACCGTTTCC
CCCGCTGATA CCTCCTTGCC ATCTATCGAG CCCCCGCTGG TCACCTGGTC GCGGGAGATT
GCGTCCGGCG AGACGCTTGA TGCGGTCCTT TCCGATGCGG GGCTGGATGC TTCGGATCGC
GCCGAAATCG CCTTGGCGAT TGGCACGGAA TACGATCTGC GCCGTCTGCG TCCGGGTCAC
ATCATTACGG TGGTTTCCAC AACGGACGAC AACCCGCGTC GTGTAGAGCT CGCCGTCGAA
GACGGTGTCC GGATAGAGGC GGTCTTCGGC GAACAGCTTG CCGCCCGCGT GTTGGACCCG
GATCCCGAAT TGGTGACTTT CGCCGGCGAG GCGGTGATCG AGAGCTCGAT TTTCGCCGCC
CTGAACACGG CAGACATCCC CGCCCGTTTT GCGGTGGACC TGGCGCAGAT GCTGGGCGGC
ACCGTGGATT TCCGTCGTGA TCTTGCGGGT GGCGAGACGA TGCGCCTCCT TTGGCGCGAG
GCCCGAGACG GGAACAAGAG GATTGGTCAG CCCGAGCTTG CCTTTGCCGC ACTGGATATC
GATGGCTCGG TCTATGAAAT CGTCTGGCCG AACGACGGCA GCGGCCAAGC GACGATCTAT
GTCGACGGAG AAGTCCTGCG CGTGTTTGCG CAACCGGTCG AAGGTGCACG GCTGAGTTCT
GTGTTCGGGC GCCGCACCCA TCCGGTCTAC GGCAATGTAC GGATGCACAC AGGAGTCGAC
TTCGCGGCGG CGCGCGGCAC GCCGGTACAG GCGACGGCGC CGGGCCGCGT TAGCTTCATC
GGCCGACGCG GTGGGTATGG CCGGGTCGTC GAGATCGCTC ATGGCTCCGA CACCCTGACG
CGCTATGCGC ATCTGAGCGC CGTACCGGAC GGGCTCACAC AAGGGCAACG CGTGATGGCC
GGAGATATGA TCGGGCGGGT CGGTGCGACG GGTACCGCGA CAGGCCCCAA CCTACATTAC
GAAGTGCTGG TGGACGGTCG CCCAACCGAC CCTCTCTCTG ACGACCGATT GGCAGAGGCG
GCCGAGCGTG AAGCGGACGA CACGGCCGCG CTTGAGCGAC TGCGTGAGGC GCGTTCACTT
CTTGCTGAGA GGCTCGCCAG CGAATTTGCA CAGACGACAA CCGAAAGGCT TTGA
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| Protein sequence | MKIRTVLAAV AVAGAFSVTA IAISGVLSKE PVPPAIAEAT LWTPNPLAPP RITETNSVRP
TLAQADIAFE FRPRPLLTVS PADTSLPSIE PPLVTWSREI ASGETLDAVL SDAGLDASDR
AEIALAIGTE YDLRRLRPGH IITVVSTTDD NPRRVELAVE DGVRIEAVFG EQLAARVLDP
DPELVTFAGE AVIESSIFAA LNTADIPARF AVDLAQMLGG TVDFRRDLAG GETMRLLWRE
ARDGNKRIGQ PELAFAALDI DGSVYEIVWP NDGSGQATIY VDGEVLRVFA QPVEGARLSS
VFGRRTHPVY GNVRMHTGVD FAAARGTPVQ ATAPGRVSFI GRRGGYGRVV EIAHGSDTLT
RYAHLSAVPD GLTQGQRVMA GDMIGRVGAT GTATGPNLHY EVLVDGRPTD PLSDDRLAEA
AEREADDTAA LERLREARSL LAERLASEFA QTTTERL
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