Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3945 |
Symbol | |
ID | 5714474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | + |
Start bp | 13896 |
End bp | 14561 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641276858 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001542154 |
Protein GI | 159046484 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACAA GACGACATTT CATCCAGACG ACCACCGCGC TGTTTTCGGC ATCGATATCC AGCCCGCTCC TTGCAGACAC GTGGCCTACC GATGCGCAGA AGGCAGCTTG GGACGCACAG GTTACACCTC CCGGCTACGA CCCGGCCACG TCCAACCCTT GGGGCCTTCA CCCTCGCTTC CTGCCACAGC GGGTCCTCGC GAAGGACGGA CTTGTACCCG GTGATATCCA TGTCGATGCT GTTGCGCGCT ATCTCTACCA CATCGAAGAA GGCGGCACGG CGATGCGCTA TGGCGTGGCG ATCGCGCGCG GTAAACTTTA CGAACCGGGC ACCTATACGA TCAAGCGCAA GGTCAGGTGG CCGCATTGGC AGCCGACACA AAACATGATC GACCGCGACC CAGAGCTCTA CGCCGATATC GCTGACGGTA TGGAACCCGG ACCTGAAAAC GCGCTCGGAT CGCGAGCCCT CTATCTCTTC GTCGGCGACC GAGACACCTA TCTAAGGATT CACGGGACAC CGTATCCAAG AAGCATTGGC GGCCGTGCGA GTTCCGGCTG CGTCCGAATG GTCATGGCAC ACATCAATGA TCTCTATCCC AACGTCGAGA TTGGCTCGAC GGCATTCCTG TACTCGGCGG AAGACAGCGT CACCCCGAGA AGTTGA
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Protein sequence | MLTRRHFIQT TTALFSASIS SPLLADTWPT DAQKAAWDAQ VTPPGYDPAT SNPWGLHPRF LPQRVLAKDG LVPGDIHVDA VARYLYHIEE GGTAMRYGVA IARGKLYEPG TYTIKRKVRW PHWQPTQNMI DRDPELYADI ADGMEPGPEN ALGSRALYLF VGDRDTYLRI HGTPYPRSIG GRASSGCVRM VMAHINDLYP NVEIGSTAFL YSAEDSVTPR S
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