Gene Dshi_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3943 
Symbol 
ID5714472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand- 
Start bp12119 
End bp12763 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID641276856 
Producthypothetical protein 
Protein accessionYP_001542152 
Protein GI159046482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGAT TTTTCTCTAT CAGTATGCCC GCGGCTCAGT TTGTTAGAAA TGTCCTGCTG 
TTCAGCTTCG CTGCATTACT GCCGGTCCTG TTGTTCTACG TCTTACTGGC TCCGGGCTTT 
GCTCCGGCTC TTGCTGCCGG CGGACCGGCA CTCATGCGCT TACTAAGGCA GGTTGCGACC 
AACGGTTTGC CCGTGGTTTT TGCCGTCAAC TATGTCAGTT TTTTCCTTTT CGCTATGACA 
AAGCAACCAA AGGCGGGCTC AAGAGACACG GCGTTTTTCG TGCTGGTCGA TGTCTTGCTC 
AGAGCCCTTC TCTTTCCAGG TCTCCACGTG CTGATATACG TTCTATCTGC CGACTGGTTC 
GGGTCATTCG GCGGCAATCG TTCAACCGCT TTGGCGGTTG TATCCCCGAC TCTTGCGCGT 
TCGGCGTTTT TCGAGAACAT CTCCGGCGTT TACCTCTATG CGACTATGAT AAGCGCGTTG 
CCGCTCTACG TCTCGGCTTT CGGGCGGTCG GAATTTCTTG GACCGGTTGT ACGTCGCTTG 
CCCATGAACA CGGGCGTGAT GCTGCTTGCC CTGGCTGCGT TTGCCTTGTC GGTCGGGCTG 
ATCACGATCG GCGCACAAGG CATCGCATCT CTTCAGGCCA GGTGA
 
Protein sequence
MDRFFSISMP AAQFVRNVLL FSFAALLPVL LFYVLLAPGF APALAAGGPA LMRLLRQVAT 
NGLPVVFAVN YVSFFLFAMT KQPKAGSRDT AFFVLVDVLL RALLFPGLHV LIYVLSADWF 
GSFGGNRSTA LAVVSPTLAR SAFFENISGV YLYATMISAL PLYVSAFGRS EFLGPVVRRL 
PMNTGVMLLA LAAFALSVGL ITIGAQGIAS LQAR