Gene Dshi_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3938 
Symbol 
ID5714467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp6140 
End bp6748 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content60% 
IMG OID641276851 
Productcalcium-binding EF-hand-containing protein 
Protein accessionYP_001542147 
Protein GI159046477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA ACACTTTACT CGCTGCAATG ACCCTGGCTG CAACCGCCCT TGGCGGTGCC 
GCATTCGCGG ACGCCAACCA CGGGCGTGGG GGACAATTTG GCGCCCAGAG CGGACCAGGC 
ATGATGCAGA ACGGTGGTCC CGGTATGATG GGGAACATGG GCGGAATGAT GGACATGATG 
AAGCGCATGC ACGGAAACAT GATGGGCGCA GGCATGATGG GCGCAGGCAT GGGCAGTGGT 
ATGATGAGCC CAGGCATGGC TGGCGGCATG ATGCAAATGT TCGACACTGA TGGAGACGGC 
ACAACGACGC CGGAAGAAAT GCGCACGCAG CTGCAGGCCA AGCTTTCCGA GTTTGACAGC 
GACGGGGATG GAAGCCTCTC GATTACCGAG TTTGAAGCTC TCCACAGCGC GATGATCCGC 
GAAATGATGG TGGATCGCTT CCAACACCTC GATGCCGATG GCGACGGCGC GGTGACGCCG 
GAAGAGATGG CCGCTCCTGC CGATAGGATG GAGCGGATGC AGATGATGCG GTCGAATATG 
GCAGATGCGC CTGCGCGGCC TGGCAACGGT CAGGGCATGG GCAACGGCTC CATGATGCAG 
GACAACTGA
 
Protein sequence
MKRNTLLAAM TLAATALGGA AFADANHGRG GQFGAQSGPG MMQNGGPGMM GNMGGMMDMM 
KRMHGNMMGA GMMGAGMGSG MMSPGMAGGM MQMFDTDGDG TTTPEEMRTQ LQAKLSEFDS 
DGDGSLSITE FEALHSAMIR EMMVDRFQHL DADGDGAVTP EEMAAPADRM ERMQMMRSNM 
ADAPARPGNG QGMGNGSMMQ DN