Gene Dshi_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3936 
Symbol 
ID5714465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp4443 
End bp5108 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID641276849 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001542145 
Protein GI159046475 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTACAA GACGACACTT CCTTGCACTT TCCGGCTCGC TGTTTTCAGC GTCTCTGAGT 
TCGCCAGCAT TCGCTAAGAC CTGGCCGTCA ACAGCCGAAA AAGCAGCTTG GGATGCGCAG 
ATCACGCCCG CCAACTATGA CCCGGCAACA ACCAACCCAT GGGGGCTGCA TCCCAGGCTG 
CTGCCGCAAC GCGTTTTGGC GAATGACGGT TTGCGCCCGG GTGACATTCA CGTCGATGCG 
ATCGCGCGCT ATCTGTACCA TATCGAGGAA GGTGGCACCG CGATGCGATA CGGGGTGGCG 
ATTGCCAAGG GCGATCTCTA TGAACCCGGC ACCTATACGA TCCGCCGAAA GGTCGAATGG 
CCGCACTGGA CGCCAACGCA GTCAATGATC GAACGCGATC CGGAGGCTTA CGAGCGGTTT 
GCCGACGGTA TGGAGCCCGG CCCCAACAAT GCCTTGGGCA GCAGGGCTTT GTATCTATTC 
GTCGGAGATC GGGATACGTA CCTTCGAATT CACGGAACGC CGAGCCCTCG CAGCATTGGC 
GGCCGGGCCA GTTCGGGATG CGTGCGCATG GTGATGGCCC ACATCAATGA TCTCTATCCG 
AATGTCGCTG TCGGATCGAC GGCGTTCCTT TACTCGGCCG AAGACAGCGT TACCGCTCGA 
AGCTAA
 
Protein sequence
MVTRRHFLAL SGSLFSASLS SPAFAKTWPS TAEKAAWDAQ ITPANYDPAT TNPWGLHPRL 
LPQRVLANDG LRPGDIHVDA IARYLYHIEE GGTAMRYGVA IAKGDLYEPG TYTIRRKVEW 
PHWTPTQSMI ERDPEAYERF ADGMEPGPNN ALGSRALYLF VGDRDTYLRI HGTPSPRSIG 
GRASSGCVRM VMAHINDLYP NVAVGSTAFL YSAEDSVTAR S