Gene Dshi_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3912 
Symbol 
ID5714441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp140779 
End bp141261 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID641276825 
ProductFerritin Dps family protein 
Protein accessionYP_001542121 
Protein GI159046450 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.530114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGA ACTTCGCCGA TGGCCTTAAC CAAGACACCC GGGCGCAGGT CGTCGATTTG 
TTGAACGAGA ACTTGGTGAA CGTTATCAAC CTTACGCTAG CCGTGAAACA GGCGCATTGG
AACCTCAAAG GACGCGGCTT CATCGGGGTT CACGAGCTTC TCGACGATGT GGCCGACCGG
CTACGCGACG GGGCCGATAC CATGGCCGAG CGTGCGGTGA TACTTGGCGG ATACGCCAAG
GGCACCGCGG AAGTCGTCGC CGAACAATCC ACACTTGAAG CCTATCCGCT CGAGTTGTCC
GAGATCTCCG AGCATATCGA ACACCTCAAG GCGCGTTTCA TGGAGGTCGG CAAGGCTATT
CGTGCGGCTG CCGAGGTTGC CGAGGAGGCA GGCGACGAAG ATACAGCGGA CCTGTTCACC
GAAATTAGCC GCGGTGTGGA CAAGGACGCA TGGTTCATCG GCGCGAACGC AGAGGGAGCG
TAA
 
Protein sequence
MPTNFADGLN QDTRAQVVDL LNENLVNVIN LTLAVKQAHW NLKGRGFIGV HELLDDVADR 
LRDGADTMAE RAVILGGYAK GTAEVVAEQS TLEAYPLELS EISEHIEHLK ARFMEVGKAI
RAAAEVAEEA GDEDTADLFT EISRGVDKDA WFIGANAEGA