| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3906 |
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| Symbol | |
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| ID | 5714435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 133997 |
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| End bp | 135598 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641276819 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001542115 |
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| Protein GI | 159046444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG CGAAATTTGA CCTTCACTGG ATCGATTACG CCATCGTTGT CATCTATTTC
ATCGGCGTGA TCGCGCATGG CGTCTATGTC TCGCGCAAGA ACGAGGAAGG CGCAGACGGT
TACTTCCTCG CGGGACGGTC GCTGCCTTGG TACCTGATTG GGTTTTCGCT TTTCGCGTCG
AACATGTCGG GTTCCAGCTT CGTGGGTTTG ATGGGCGGCG CCTATGCAAA CGGTATCGTT
ATCTTCAACT ACGAATGGAC CGCTGCACTC GTCCTGATCC TGTTCGCAAT CTTCGTGCTG
CCCTCCTTCC TGAAAGCGAA AATCTCCACC GTCCCCGAAT TTCTCGAGCA GCGCTATGAC
GTGCGCTCGC GGCGGGCCTT CTCGATATTT ACCATTCTTG CCATCCTGTT CATCGACACG
GCCGGGGCGC TCTATGCCGG TGGGCTCGTG ATTTCGAACG TGACGGGTTA CCTCAACCTC
TGGACAGCCG TCGCCGTCCT GGCCCTCGTT GCGGGTATCT ATACCATCCT TGGTGGTCTT
TCGGCGGTGG TGGTCACCGA CACTGTGCAG GCAATCCTGC TGATCATCGG CGCCGCGATC
CTATTCTGGC TCGGCCTTGA CGAGATCGGT GGGTGGGAAC AGCTCTTCGT CGACATTCCC
GAAGGCCACG ACCAACTTAT CCTGCCTGCC GATGACGATT TCCTGCCGTG GACGGGGCTG
TGGGGCGTGG TCTTGCTGGG ATTTTATTAC TGGACCATCA ATCAATTCGT GGTGCAGCGC
ACGCTGGGCG CCAAGAACCT CAAGGAAGGG CAGATCGGTG CCCTCTTCGC GGGCTTTCTC
AAACTGCCGA ACATCTTTCT GATGATCATC CCCGGGGTCA TCGCCCTGAA ACTCTATCCC
GAGCTTGAAA CACCTGACCT CGCCTTCCCG ACCCTCGCTT TCGAACTGAT GCCGATTGGT
GTGCGGGGCC TGATCATGGC CGCCCTGATC GCAGCGATCA TGTCCTCACT CGACTCGGCC
ATGAATTCCG CCTCCACCCT TGTGGTCAAA GATTTCGTCG AGCCGATCTG GGAGGTAGAC
GAGGGCAAGC AGGTTTGGAT CGGCCGTTTG GTGACCGGCG CTGTCATGGT CTTCGGCGCG
ATCTATGCGC CTTCCATTGC CGGGTTCGAA AGCCTGTTCA GCTACTTCCA GTCCTCGTTG
AGCTACATAA TCCCCACCAT CGTCGTGGTC TATATCGTCG GCCTTTTCGT GCCATGGCTG
AACGGCAATG GCGCATTCTG GACGATTATC CTTGGCCTCG TGGTGGGCAT TCCTCTGTTC
ATCATGAAAG AGGTGACGGG CGTCTGGGCC GGCATGGGCC TGCCCGAGAT CCACTATACG
ATCATGTCGA CCCTCATGAT GTGTCTGGGC CTGGCCACTC ATTTCGGGAT CTCCGCTCTG
ACCCGAAAGG CCGACAAGGA AAACATCGAG GACCTCGTCT GGTCTGCCGC CGACACAAAG
GCCATTTTCA CCCAATGGGA AGAGCCACTG TGGCAGGACC GTACGATCTG GGCCGGGTTG
CTGATCCTGT CGACCATCGG TTTTGTCGCG TGGTTCTGGT AA
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| Protein sequence | MGDAKFDLHW IDYAIVVIYF IGVIAHGVYV SRKNEEGADG YFLAGRSLPW YLIGFSLFAS
NMSGSSFVGL MGGAYANGIV IFNYEWTAAL VLILFAIFVL PSFLKAKIST VPEFLEQRYD
VRSRRAFSIF TILAILFIDT AGALYAGGLV ISNVTGYLNL WTAVAVLALV AGIYTILGGL
SAVVVTDTVQ AILLIIGAAI LFWLGLDEIG GWEQLFVDIP EGHDQLILPA DDDFLPWTGL
WGVVLLGFYY WTINQFVVQR TLGAKNLKEG QIGALFAGFL KLPNIFLMII PGVIALKLYP
ELETPDLAFP TLAFELMPIG VRGLIMAALI AAIMSSLDSA MNSASTLVVK DFVEPIWEVD
EGKQVWIGRL VTGAVMVFGA IYAPSIAGFE SLFSYFQSSL SYIIPTIVVV YIVGLFVPWL
NGNGAFWTII LGLVVGIPLF IMKEVTGVWA GMGLPEIHYT IMSTLMMCLG LATHFGISAL
TRKADKENIE DLVWSAADTK AIFTQWEEPL WQDRTIWAGL LILSTIGFVA WFW
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