| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3885 |
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| Symbol | |
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| ID | 5714414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 108221 |
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| End bp | 109795 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276798 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001542094 |
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| Protein GI | 159046423 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.196941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGT CACAAGATCG TTCGCACCAG GCGGAGAACA GCGACGCCAG AATTCAGGTG
CTGATCACGG CGGCCGAGGC ATTTCCCGAG CTGGAACGTG CCTTTCTGGC AGCGTCATCG
GAGATCTGGG CGAGCTTTCG AGTGTTTGAC CTGCGCACGA AACTGCGCAG CGATGCCGCG
AAGGCAATAG GCGAGACCTG GTTTGATCTG GTCGAACACA CGCTGTCCCG TGGGGTGGCG
ATCCACATGG CGATCTCAGA TTTCGATGCC ATCATGGCCC CGCGCCTGCA CAATCACACA
TGGAATTCGA TGCGTGCCTT TCTGGCCGCG GCGGAAATCG CCGGCCCGCA GGCGTGTCTG
GACGTGGTGG GTGCGGCGCA TCCCGCCCGG GCGGGGCGCC CGCATCGTGT GCTTGTCTGG
CCTTGGGTCT ATCGCCGCCT GGCCGAGGTG GTCGAGGATC TGAACGCGGA TACGCCCGAC
CGGCGCGCCC GACGGCTGGA GCATTTGCCG GGTCTTGCGC GCCATGTCGA GAAGGATGAC
GACGGGTTTG TCCGTGCCAA GCGTTGGCCG CCCGCGGACC TGTTGCCGGT GACGCACCAC
CAGAAGCTTG CCGTCTTCGA CCGCAAGACC GTGTATATCG GGGGGCTCGA CCTCGATGAG
CGGCGTTATG ACGACCCCGA TCATCAGCGC GGCCGCGACG AGACATGGCA CGACGTGCAG
CTCATGGTGG AGGGAGGTGC GCTGGCCCGC GAAGCCCAGA GCCATGTCGA ACAGTTCCTG
AAGGTCACCG CCGGTCGTGG GGACCCGCCT CCGGCGACCG AGCTTTTGAC GACCGTATCG
CGGCGGCACC GGGTGACGAC CCCGTTTCTG GGACCAAAAC CCGTGCGCAA TACGCTGCTG
GAAGCGCATC TGGCGCGTAT TGAATCGTCG GAGGATCTGA TTTATCTCGA AACGCAGTTC
TTTCGCGACA TTCGCATTGC GGACGCACTG GCCAAGCGCA AGCGGGAGGC GCCATCGCTC
GACCTCATCG TGGTGCTGCC CGGGGCGCCG GAGGATGTGG CTTTTGATGG CGCAACCTCG
AGCGATGCGA AGTTCGGCGA GTTTCAGCAG GTACGCGCCT TTGACCGGGT GCAGCAGGCC
TTCGGCGAGG ATTGCATCTT TTGTGCGCCG GTGCGGCCCG AGGCTTATGA TACCGGCAAG
CGGGATTGTC TTGCGGGATC GCCGATCATC TACGTGCATG CCAAGCTGGC GATCTTCGAT
ACCACCCGGG CCATCGTGTC CTCGGCCAAT CTCAACGGGC GGAGCCTGTC CTGGGATACC
GAGGCGGGGC TCGAGCTTGA TGATCCCGAG ATGGTAGCCC ACCTGCAAAG GCGGACCTTC
AGCCATTGGT ATGGAGAGGA TGCGCCCGAA GCTTTTCTCG CCCCTGACAC TGCTGTCTCG
GAATGGCGCA AGCGAGCGAT GCGCAATTTG CAAGCCAAGC CCTCGGCTCG GCAGGGTTTT
CTCGTGCCCT ATGACCCTGA ACCGGCGCGT GCGTTTGGAC GATGGGTGCC CGGTGTGCCG
GATGCGCTCG TCTGA
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| Protein sequence | MLTSQDRSHQ AENSDARIQV LITAAEAFPE LERAFLAASS EIWASFRVFD LRTKLRSDAA
KAIGETWFDL VEHTLSRGVA IHMAISDFDA IMAPRLHNHT WNSMRAFLAA AEIAGPQACL
DVVGAAHPAR AGRPHRVLVW PWVYRRLAEV VEDLNADTPD RRARRLEHLP GLARHVEKDD
DGFVRAKRWP PADLLPVTHH QKLAVFDRKT VYIGGLDLDE RRYDDPDHQR GRDETWHDVQ
LMVEGGALAR EAQSHVEQFL KVTAGRGDPP PATELLTTVS RRHRVTTPFL GPKPVRNTLL
EAHLARIESS EDLIYLETQF FRDIRIADAL AKRKREAPSL DLIVVLPGAP EDVAFDGATS
SDAKFGEFQQ VRAFDRVQQA FGEDCIFCAP VRPEAYDTGK RDCLAGSPII YVHAKLAIFD
TTRAIVSSAN LNGRSLSWDT EAGLELDDPE MVAHLQRRTF SHWYGEDAPE AFLAPDTAVS
EWRKRAMRNL QAKPSARQGF LVPYDPEPAR AFGRWVPGVP DALV
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