Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3883 |
Symbol | |
ID | 5714412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | - |
Start bp | 106070 |
End bp | 106648 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641276796 |
Product | hypothetical protein |
Protein accession | YP_001542092 |
Protein GI | 159046421 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.230327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGGG ATAAGCGCGA AGCCTGGACC AAACGTCTGG CCCGCCACCG GACCGGCCTT GCCGCCATGT CCTTTGCCGA GAGCACCGTG GTGCCGATCC CGTTGGAGAC AATCGTCGCA CCGCTCATGG TCGGCGAGCA TCGTCATGCG ACCACCATCG CGCTGGCGAT CTGGCTCGGC TGCCTTGCCG GGGCGACGCT GTTCTTCGGC CTCGGCGTCT GGCTGGCAGA GCCTGTCGTC CTGCCGATCC TCGACTGGTT GGGGCTGAGA TCCACGTTCG AAAGCATTCT GGACGATCTG GGGCGCGACG GTCTGTTCTG GACGATCTTT CTTGTGTCCT TCTCACCCGC CCCGATGCAG ATCGCGACAC TGGGGGCCGG GGCGGGCCAT GGCAATTTCC TGATCTTCCT CGCCGCCATC GCCAGTTCGC GGGGGCTGCG CTATTTCGGA CTCGCGGTCC TGGCCAAGTT GTTCGGCCCC AAGATCGCCG AATGGAACAT CCCGACGGGC CGCCTCGTGC TGGGCGCCGT GATTATCGGC GGGACTATCT GGGGCACCCT GCAAATGCTC GGGCGTTGA
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Protein sequence | MPGDKREAWT KRLARHRTGL AAMSFAESTV VPIPLETIVA PLMVGEHRHA TTIALAIWLG CLAGATLFFG LGVWLAEPVV LPILDWLGLR STFESILDDL GRDGLFWTIF LVSFSPAPMQ IATLGAGAGH GNFLIFLAAI ASSRGLRYFG LAVLAKLFGP KIAEWNIPTG RLVLGAVIIG GTIWGTLQML GR
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