Gene Dshi_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3883 
Symbol 
ID5714412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp106070 
End bp106648 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID641276796 
Producthypothetical protein 
Protein accessionYP_001542092 
Protein GI159046421 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.230327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGG ATAAGCGCGA AGCCTGGACC AAACGTCTGG CCCGCCACCG GACCGGCCTT 
GCCGCCATGT CCTTTGCCGA GAGCACCGTG GTGCCGATCC CGTTGGAGAC AATCGTCGCA
CCGCTCATGG TCGGCGAGCA TCGTCATGCG ACCACCATCG CGCTGGCGAT CTGGCTCGGC
TGCCTTGCCG GGGCGACGCT GTTCTTCGGC CTCGGCGTCT GGCTGGCAGA GCCTGTCGTC
CTGCCGATCC TCGACTGGTT GGGGCTGAGA TCCACGTTCG AAAGCATTCT GGACGATCTG
GGGCGCGACG GTCTGTTCTG GACGATCTTT CTTGTGTCCT TCTCACCCGC CCCGATGCAG
ATCGCGACAC TGGGGGCCGG GGCGGGCCAT GGCAATTTCC TGATCTTCCT CGCCGCCATC
GCCAGTTCGC GGGGGCTGCG CTATTTCGGA CTCGCGGTCC TGGCCAAGTT GTTCGGCCCC
AAGATCGCCG AATGGAACAT CCCGACGGGC CGCCTCGTGC TGGGCGCCGT GATTATCGGC
GGGACTATCT GGGGCACCCT GCAAATGCTC GGGCGTTGA
 
Protein sequence
MPGDKREAWT KRLARHRTGL AAMSFAESTV VPIPLETIVA PLMVGEHRHA TTIALAIWLG 
CLAGATLFFG LGVWLAEPVV LPILDWLGLR STFESILDDL GRDGLFWTIF LVSFSPAPMQ
IATLGAGAGH GNFLIFLAAI ASSRGLRYFG LAVLAKLFGP KIAEWNIPTG RLVLGAVIIG
GTIWGTLQML GR