| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3882 |
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| Symbol | |
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| ID | 5714411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 105261 |
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| End bp | 105971 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641276795 |
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| Product | transposase, putative |
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| Protein accession | YP_001542091 |
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| Protein GI | 159046420 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.227634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACC AATCGCCATT CAAGCACCAT CGCTTCCCAC GAAACATGAT CCTTTGCGTG
GTGCGCTGGT ACCTGCGCTA TCCCCTGTCC TACCAGGATG TCGTGGATCT GCTGGCCGAG
CGCGGCGTGA CTGTTGATCG ATCGACGGTT TATCGCTGGG TCCAGAAGTT TGGCCCGGAA
CTTACAAAGC GCACCGAGCG GCATCTGCGC CGGACCAGCG TTGATTGGCA CGTGGATGAA
ACCTACGTCC GCGTCGGCGG CAAATGGCGC TACCTCTGGC GGGCGGTGGA TGCCAACGGT
CAGATGGTCA ATTTCCGGCT GACTGCCAGA CGGGACGCGA AAGCGGCCAA GGCCTTCCTC
AACAAAGCCA TCGAGCGGGT CCGGCTGCAT CGACCAGTCA CGATCTGTAC TGACAAAGCC
CACACCTATC GGCGGGTTAT CCGGGAAATC AATCATCGCT ATGACCCGCA CTTCGACAGC
ATCCGGCACA CTGACCGGAA ATGGCGAAAC AACCTGATCG AGAGCGATCA CGCGGCGATG
ACGCGCCTGC TCGGGTATCG TCAGAGCTTT CGGTCTTTGC GAACCGCCAA GGCAACCCTG
AGTGGCAGCG AAACGATCCG AACCATCAAA CGCGGCCACA TCCACAACAA ACAACCCGGC
GTCAAAGGCG AGATCGCGTT CATCGCCAGC CTGTTCGCAG TGGTTGCATG A
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| Protein sequence | MPHQSPFKHH RFPRNMILCV VRWYLRYPLS YQDVVDLLAE RGVTVDRSTV YRWVQKFGPE
LTKRTERHLR RTSVDWHVDE TYVRVGGKWR YLWRAVDANG QMVNFRLTAR RDAKAAKAFL
NKAIERVRLH RPVTICTDKA HTYRRVIREI NHRYDPHFDS IRHTDRKWRN NLIESDHAAM
TRLLGYRQSF RSLRTAKATL SGSETIRTIK RGHIHNKQPG VKGEIAFIAS LFAVVA
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